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EBI DbfetchID BC088310; SV 1; linear; mRNA; STD; ROD; 1166 BP. XX AC BC088310; XX DT 24-DEC-2004 (Rel. 82, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 8) XX DE Rattus norvegicus phosphoserine phosphatase, mRNA (cDNA clone MGC:109524 DE IMAGE:7324292), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1166 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1166 RG NIH MGC Project RA ; RT ; RL Submitted (20-DEC-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000002075. DR Ensembl-Gn; ENSRNOG00000000925; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000001228; Rattus_norvegicus. DR ImaGenes; IMAGp998L1815392Q. DR ImaGenes; IRAKp961F07215Q. DR ImaGenes; IRBPp993C0934D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical CC College of Wisconsin CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 215 Row: f Column: 7 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 57527331. XX FH Key Location/Qualifiers FH FT source 1..1166 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_247" FT /clone="MGC:109524 IMAGE:7324292" FT /tissue_type="Liver, rat" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..1166 FT /gene="Psph" FT CDS 236..913 FT /codon_start=1 FT /gene="Psph" FT /product="phosphoserine phosphatase" FT /db_xref="GOA:Q5M819" FT /db_xref="InterPro:IPR004469" FT /db_xref="UniProtKB/Swiss-Prot:Q5M819" FT /protein_id="AAH88310.1" FT /translation="MVSHSELRKLFCSADAVCFDVDSTVIREEGIDELAKFCGVEAAVS FT EMTRRAMGGALPFKDALTERLALIQPSRDQVQRLLAEHPPHLTPGIRELVSRLQERNVQ FT VFLISGGFRSIVEHVAAKLNIPTTNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIG FT FLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE FT LEE" XX SQ Sequence 1166 BP; 318 A; 275 C; 305 G; 268 T; 0 other; ggcttctcca gttggaagca cacatgccaa actgctctgg agacgccgga ggcatcggca 60 gatcccagac gagcgttgag tgaaggctgt gatctgcctt accggtcacc tcactcagga 120 cacagcgctc gcacgttgca gcagctccag accccactac taccggaaag ttacaggtac 180 cggaaccaag aagaccagcg cggcccagga acagcggagg aaaactcttc ccaggatggt 240 ctcccactca gagctgagga agctcttctg ttcggctgat gcagtgtgct ttgatgttga 300 tagcacagtc atcagagaag agggaatcga tgagctggcc aaattctgtg gtgtggaggc 360 tgcagtgtct gaaatgacac ggagagccat gggaggagcg ttgcctttca aagatgcgct 420 cactgagcgc ctggcactga tccagccctc cagggatcag gtgcagaggc tgctggctga 480 acacccgcca cacctgaccc cggggataag ggagctggta agccgcctcc aggagcggaa 540 tgttcaggtg ttcctcatct ccgggggctt taggagtatt gtggagcacg ttgctgcaaa 600 gctcaacatc cccacaacca atgtctttgc caataggctg aaattctact tcaacggtga 660 gtacgcaggt tttgacgaga cgcagccgac agccgagtca ggtgggaaag gaaaggttat 720 tggattttta aaggaaaaat ttcactttaa gaaaataatc atgattggag acggagccac 780 agacatggaa gcctgccctc ccgctgatgc cttcattggc tttggaggca acgtgatcag 840 gcagcaggtt aaggacaatg ccaagtggta catcactgac tttgttgaac tgctaggaga 900 actggaagaa tgatctggac ttcccggtca ctcagaacaa ctccaccttc tcgacgctac 960 acagttgggc tcctggaaga gtctaggaga cagctatttt tttctactgt agttccaata 1020 ttaatatgac tactaattac atggagagtt ttatattctg aattctttgt gtatattcct 1080 cggaatattt tacctggagc tttctgaggt gcatagtaaa ttaaatgcct ttactcttgc 1140 aaaaaaaaaa aaaaaaaaaa aaaaaa 1166 // |
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