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EBI DbfetchID BC088252; SV 1; linear; mRNA; STD; ROD; 974 BP. XX AC BC088252; XX DT 04-JAN-2005 (Rel. 82, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 7) XX DE Rattus norvegicus similar to RIKEN cDNA 0610012D14, mRNA (cDNA clone DE MGC:109059 IMAGE:7372248), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-974 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-974 RG NIH MGC Project RA ; RT ; RL Submitted (20-DEC-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000004311. DR Ensembl-Gn; ENSRNOG00000019424; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000026291; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000067562; Rattus_norvegicus. DR ImaGenes; IMAGp998J2215517Q. DR ImaGenes; IRAKp961E20216Q. DR ImaGenes; IRBPp993C0336D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical CC College of Wisconsin CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 216 Row: e Column: 20 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 57528241. XX FH Key Location/Qualifiers FH FT source 1..974 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_246" FT /clone="MGC:109059 IMAGE:7372248" FT /tissue_type="Liver, rat" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..974 FT /gene="RGD1310111" FT /note="synonym: MGC109059" FT CDS 21..914 FT /codon_start=1 FT /gene="RGD1310111" FT /product="similar to RIKEN cDNA 0610012D14" FT /db_xref="GOA:Q5I0J9" FT /db_xref="InterPro:IPR002811" FT /db_xref="InterPro:IPR005106" FT /db_xref="InterPro:IPR011182" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q5I0J9" FT /protein_id="AAH88252.1" FT /translation="MDASMVPRVPHKVGVVGYGRLGQSLVSRLLAQGSELGLELVFVWN FT RDPGRMAGSVPPALQLEDLTTLEERHPDLVVEVAHPKIIHESGVQILRHANLLVGSPSA FT LADQTTERQLLEASNHWGHTVFVARGALWGCEDISRLDAAGGLQSLRVTMATHPDGFRL FT EGPLAAAHSSGPRTVLYEGPVRGLCPLAPRNSNTMAAAALAAPSLGFDRVIGVLVADLS FT LTDMHVVDVELTGPQGPQAAALPCTPTERTQPSLALSLAPLLLQPSGTAYWAAVSFPPD FT LGSASAEFPPLPLLSP" XX SQ Sequence 974 BP; 203 A; 302 C; 268 G; 201 T; 0 other; cccacagcag gataaaggcc atggacgcta gtatggtccc tcgagttcct cacaaggtgg 60 gggtggtggg ctatggccgc ctcggacagt cccttgtgtc ccgccttctg gctcagggat 120 cagaactggg cctagaactt gtttttgtgt ggaaccgtga ccctggacga atggcaggga 180 gtgtgccccc tgccctgcag ctcgaagacc tcactacact tgaggaaagg caccctgacc 240 ttgtggtaga agtggcccat ccaaaaataa tccatgaatc tggggtacaa atcctccgtc 300 atgcaaacct tctggtggga tccccctcag ctctcgctga ccagaccaca gagcggcagc 360 tcctggaggc ttcaaaccac tggggccaca cggtgtttgt ggcccgaggg gccctgtggg 420 gttgtgaaga catcagcaga ttggatgcag ccggaggcct ccagagcctt cgagtcacca 480 tggccacaca tcctgatggc ttccggctgg agggacccct ggctgccgca catagtagtg 540 ggccccgcac agtgctctat gagggccctg tgcgtgggct ctgccccttg gccccccgaa 600 actccaacac catggcagcc gctgccctgg ccgctcccag tctaggcttt gatcgtgtca 660 ttggggtgct tgtggctgac cttagcctca ccgacatgca tgtggtggat gtggagctga 720 caggccccca gggcccacag gccgcagctt tgccgtgcac acccacagag agaacccagc 780 ccagcctggc gctgtcactg gctccgctac tgttacagcc ttctggcaca gcttactggg 840 ctgctgtcag cttccctcca gacctgggat ccgcctctgc tgagtttcct cccctaccct 900 tgctgtcacc ttgactacta tgggtcccag taaacatcag aattctgaaa aaaaaaaaaa 960 aaaaaaaaaa aaaa 974 // |
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