 |
|
EBI DbfetchID BC085403; SV 1; linear; mRNA; STD; VRT; 2086 BP. XX AC BC085403; XX DT 03-NOV-2004 (Rel. 81, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 5) XX DE Danio rerio dullard homolog, like, mRNA (cDNA clone MGC:101656 DE IMAGE:7226373), complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2086 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2086 RG NIH MGC Project RA ; RT ; RL Submitted (01-NOV-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000035781; Danio_rerio. DR Ensembl-Tr; ENSDART00000075596; Danio_rerio. DR ImaGenes; IMAGp998D1915140Q. DR ImaGenes; IRAKp961I04197Q. DR ImaGenes; IRBOp991D1155D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Will Talbot CC cDNA Library Preparation: Dr. Yutaka Suzuki and Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 197 Row: i Column: 4 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 55250004. XX FH Key Location/Qualifiers FH FT source 1..2086 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_15" FT /clone="MGC:101656 IMAGE:7226373" FT /tissue_type="Embryo, whole, 2-8 hr, mixed wild type, pool FT of 2500 embryos" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2086 FT /gene="dullardl" FT /note="synonym: zgc:101656" FT CDS 282..1019 FT /codon_start=1 FT /gene="dullardl" FT /product="dullard homolog, like" FT /db_xref="GOA:Q5U3T3" FT /db_xref="InterPro:IPR004274" FT /db_xref="UniProtKB/Swiss-Prot:Q5U3T3" FT /db_xref="ZFIN:ZDB-GENE-041114-152" FT /protein_id="AAH85403.1" FT /translation="MLKTRQCLLGVRTFHGVTSRIWSFFLYILRKHIRTIIQYQTVRYD FT ILSLSPISRNRLNNVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHP FT VRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKAILKRRYYRQHCT FT LDSGSYIKDLSVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPML FT DALRFPADVRSVLSRNLHQHRLW" XX SQ Sequence 2086 BP; 544 A; 464 C; 462 G; 616 T; 0 other; agttgctctg accaccttag ccgacgagcg tttgaaagac ttcacagagg aaccctgtct 60 aaacgtcaag acattcacct gaggacttca cgagcacgtg cttttcctca accgctgcac 120 ttttgtacgt ttcctcggtt tatttcagtc atattaaggc gcgtcgggac gccccggtgt 180 gaagttgtga atggtcggcg ggatcttatt tccacaggtg tgttgttgta caggtattgc 240 ggtgtaaatc acacctcacg gactctggtg ttatggttga catgctaaag acccgccaat 300 gtctgctcgg tgtgcgcact ttccacggcg tgacgtccag aatatggagc ttctttttat 360 acatcctcag gaagcacata cgaacgatca tccagtatca gacagtgcga tatgacattt 420 tatcattgtc gcccatttcc agaaacagac tcaacaacgt gaagcgaaag atcctggttt 480 tagatctgga tgagacgttg attcattccc atcacgatgg ggtcctcaga ccgacagtac 540 ggcctggtac accgccagat ttcatcctca aagtggtaat agacaagcac ccggtcagat 600 tctttgtcca taaacggccg cacgtggact tcttcctgga ggtggtcagt cagtggtatg 660 agttagtagt tttcactgct agtatggaga tctatggctc cgcagtagcg gataaactag 720 ataacaacaa ggcaatcctc aaaagaagat actacagaca gcactgtacg ctggattcag 780 gtagttatat taaagacctg tcagtcgtac acgatgactt atcaagtgta gttattctcg 840 acaactcacc gggagcgtat cgaagtcatc cagataatgc aatacctata aagtcatggt 900 ttagtgaccc cagtgacaca gcacttctta acctgctgcc catgctggat gcactaaggt 960 tccccgcaga cgtacgatcc gtcctgagca gaaatctcca ccagcatcgg ctctggtgat 1020 catccggccg tttttcattt gtttctgctt ctcgatctgg catccgcctc tccgttagcc 1080 cttcgcctcc tacagaacag ccttacagga ggcctataaa gaggagagtc aatctgaact 1140 caaaatgaga tgcacacttt aggatgcttc gagaagcttt cgttttgcct agtttgtgtt 1200 ctcttcaaaa tggagtctct gccttacagc tctacctatg ctgatcgtgt atgtatgtat 1260 gtgtgtgagt tatgtgtgtg tgtgtgtgta cgaggacatc tgctgtcttt ctttttaaat 1320 atttgaggat gctgggataa ggaaaacaac aaacagacat tttcttgact tgcgtcttca 1380 atcccagctt gggacaccat acctcacttc acaaagtggt gcagatctgc taaatgcact 1440 ggataaaacg aggccactcg gaagtggaca cgacactctg cacatctaat agagttgact 1500 ggaagaagtg gattatgaca gaccggtaga cttcagggta atcggggtaa agcgttgtat 1560 atgctattat tgaggtactg tgttggaaga catgggtttt aatgacttgt gtgattgtga 1620 gattgtttct ccacactctg cagaaaatga tgatgtttta ttcttttggc caattaatct 1680 attttattct cggcgctaaa tgaatttatc ataaattatc agggaggatg taaaggagtt 1740 tgagctttga agaagccgaa tgacagattt taagcctttt cttctctaca gaatgtatgt 1800 ggtcgattat gaaatcactt ggacgccttt tttcaaatgt ttttcttttc tgataatgta 1860 ataatggtaa gacttgaatt tctaaaacgt gtacttcatt gtattgaaga gctgactgag 1920 caacagacaa cccccccccc ccctctcctt tttttttctt ttttacactc aaggccttgt 1980 tggtttctct gtgcacctgt cagataaagt cagttcggtt ctcctccatc taacacttgt 2040 taagtctcaa ggcagcttcc tgggacacaa aaaaaaaaaa aaaaaa 2086 // |
|