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EBI DbfetchID BC083914; SV 1; linear; mRNA; STD; ROD; 2454 BP. XX AC BC083914; XX DT 02-OCT-2004 (Rel. 81, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 8) XX DE Rattus norvegicus threonyl-tRNA synthetase, mRNA (cDNA clone MGC:95288 DE IMAGE:7134406), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-2454 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2454 RG NIH MGC Project RA ; RT ; RL Submitted (01-OCT-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000026927. DR Ensembl-Gn; ENSRNOG00000019023; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000051910; Rattus_norvegicus. DR ImaGenes; IMAGp998P2015039Q. DR ImaGenes; IRAKp961G17185Q. DR ImaGenes; IRBPp993G1017D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Howard Jacobs CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 185 Row: g Column: 17 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 55741822. XX FH Key Location/Qualifiers FH FT source 1..2454 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_238" FT /clone="MGC:95288 IMAGE:7134406" FT /tissue_type="Testis, rat (Brown Norway)" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..2454 FT /gene="Tars" FT CDS 51..2138 FT /codon_start=1 FT /gene="Tars" FT /product="threonyl-tRNA synthetase" FT /db_xref="GOA:Q5XHY5" FT /db_xref="InterPro:IPR012947" FT /db_xref="UniProtKB/Swiss-Prot:Q5XHY5" FT /protein_id="AAH83914.1" FT /translation="MSEEKASSPSGKMDGEKPLNPWPEYINTRLDMYHKLKAEHDSILA FT EKAAKDSKPIKVTLPDGKQVDAESWKTTPYQIACGISQGLADNTVVAKVNKVVWDLDRP FT LETDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYYDMYLEE FT GGVSSNDFSSLETLCKKIIKEKQTFERLEVKKETLLEMFKYNKFKCRILNEKVNTPTTT FT VYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMETLQRIYGISFPDPKLLK FT EWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIRSEYRKRG FT FQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQFALKPMNCPGHCLMFDHRPRSW FT RELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLDFLRTV FT YSVFGFSFKLNLSTRPEKFLGDIEIWNQAEKQLENSLNEFGEKWELNPGDGAFYGPKID FT IQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIVHRAILGSVERMIAIL FT TENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVRQEFHDAKFMVDIDLDPGCTLNKKIR FT NAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTVGETVERLQQLKQLRSKQAEEE FT F" XX SQ Sequence 2454 BP; 711 A; 530 C; 644 G; 569 T; 0 other; ggtcttttgt gccgtgtagt tcttggattt tgtctctcag cggtccttct atgtcggagg 60 agaaggctag cagcccttcg gggaagatgg acggcgagaa gccgttgaat ccctggccgg 120 agtacattaa cacacgcctt gatatgtacc acaagctcaa agcagagcat gattccatcc 180 tggctgaaaa ggcagcaaaa gacagcaagc cgattaaagt caccctgccc gacggcaagc 240 aagtggatgc tgagtcctgg aaaaccacgc cgtatcagat tgcatgtggc attagccagg 300 gcctggctga caacaccgtt gttgctaagg tgaacaaggt tgtttgggac ctggaccgcc 360 cgctggagac agactgcact ctggagctgc tcaagtttga ggacgaggaa gcacaggcag 420 tatattggca ctctagtgcc cacataatgg gtgaggccat ggaaagagtc tacggtggat 480 gcttatgtta cggccctcca atagaaaacg gcttctatta tgatatgtac cttgaagaag 540 ggggtgtgtc cagcaatgat ttctcttccc tggaaacttt gtgtaagaaa atcattaaag 600 agaaacaaac ttttgaaaga ttggaagtta aaaaggaaac attactagaa atgttcaagt 660 acaacaagtt caagtgccgg atattgaatg agaaagtgaa tactccgacc acgactgtct 720 atagatgtgg ccccttgata gatctctgcc gtggtcctca cgtccgacac actggcaaga 780 ttaagactct gaaaatacac aagaattcct ccacgtactg ggaaggcaaa gcggacatgg 840 aaacgctcca gaggatttat gggatttcat tccccgaccc caaactactg aaagagtggg 900 agaagttcca agaggaagcc aagaaccgag accataggaa gattgggcgg gaccaagaac 960 tatatttctt ccacgaactc agccctggaa gttgcttttt cctgccaaaa ggagcctaca 1020 tttataatac actgatggaa ttcatcagga gtgaatatag gaaaagaggg ttccaggagg 1080 tcgtcacccc caacatcttc aatagccggc tctggatgac ctctggccac tggcagcact 1140 acagtgaaaa catgttctcc tttgaggtgg agaaggagca gtttgccctc aagcccatga 1200 actgcccagg acactgcctg atgttcgatc atcggccgag gtcctggcga gagctgcccc 1260 tgcggttagc tgattttgga gtgcttcaca ggaacgagct ctcaggggct ctcactggac 1320 tcacacgggt ccgaagattc cagcaggatg acgcacacat attctgtgcc atggagcaga 1380 ttgaagatga gatcaaaggt tgtttggatt ttcttcgcac ggtatatagt gtctttggat 1440 tttcatttaa actgaatctt tctactcgcc cagaaaaatt cctgggagat attgaaatat 1500 ggaaccaagc tgagaaacaa cttgaaaaca gtttgaacga atttggtgag aagtgggagc 1560 taaatcctgg cgatggagcc ttctatggtc caaagattga tatacagata aaggacgcta 1620 ttggccgcta ccaccagtgt gcgaccatcc agctggactt tcagttgccc atcaggttta 1680 acctcactta cgtcagccat gatggcgacg ataagaagag gccagtgatc gttcaccgag 1740 ccatcctggg gtcagtggag agaatgattg ccatcctcac ggaaaactat gggggcaaat 1800 ggcctttctg gctctctcct cgccaggtga tggtggtccc agtgggaccg acctgtgatg 1860 aatatgccca aaaggtacgg caagaattcc acgatgctaa gttcatggtg gacattgacc 1920 tggatccagg ctgtaccttg aataagaaga tcagaaatgc acagttggca cagtataact 1980 tcatccttgt tgttggtgaa aaagagaaag ccagtggcac tgtgaacatc cgcacgagag 2040 acaacaaggt ccacggagag cggactgtgg gggaaacagt ggagcggctg cagcagctca 2100 agcagttgcg cagtaagcag gcagaggagg agttttaaca ggcacatggc ccgagctggc 2160 tcagtgtaga ggaagatggg tgcccatcac gtgaccttgt gcactgggaa acatggcttc 2220 atgatgagca aggagtggtt ctgccgagtc tttgtggatc agcctttctg gtctggacaa 2280 gtcttagaga atgctgttag atgggggcta agaagagaac cattaaatgt ctctctccaa 2340 aatggaaaat catggaggat gttttctgta cccaggttat tttgtatgaa ttcaatcaat 2400 tagaaaataa aaaaatttta aatgtgccta aaaaaaaaaa aaaaaaaaaa aaaa 2454 // |
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