 |
|
EBI DbfetchID BC083581; SV 1; linear; mRNA; STD; ROD; 2220 BP. XX AC BC083581; XX DT 02-OCT-2004 (Rel. 81, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 6) XX DE Rattus norvegicus methylcrotonoyl-Coenzyme A carboxylase 2 (beta), mRNA DE (cDNA clone MGC:94191 IMAGE:7129446), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-2220 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2220 RG NIH MGC Project RA ; RT ; RL Submitted (01-OCT-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000016442. DR Ensembl-Gn; ENSRNOG00000017752; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000023900; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000067484; Rattus_norvegicus. DR ImaGenes; IMAGp998B0415027Q. DR ImaGenes; IRAKp961F04184Q. DR ImaGenes; IRBPp993D1214D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Howard Jacobs CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 184 Row: f Column: 4 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 58865925. XX FH Key Location/Qualifiers FH FT source 1..2220 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_236" FT /clone="MGC:94191 IMAGE:7129446" FT /tissue_type="Kidney, rat (Brown Norway)" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..2220 FT /gene="Mccc2" FT CDS 139..1830 FT /codon_start=1 FT /gene="Mccc2" FT /product="methylcrotonoyl-Coenzyme A carboxylase 2 (beta)" FT /db_xref="GOA:Q5XIT9" FT /db_xref="HSSP:1ON9" FT /db_xref="InterPro:IPR000022" FT /db_xref="InterPro:IPR011762" FT /db_xref="InterPro:IPR011763" FT /db_xref="UniProtKB/Swiss-Prot:Q5XIT9" FT /protein_id="AAH83581.1" FT /translation="MWGALRSVLRPCSRASVPRQRAYHGDAVARLGTQPDSGSSTYQEN FT YEQMKALVNQLHERAQYVRLGGSEKARARHTSRGKLLPRDRIDNLIDPGSPFLEFSQFA FT GYKLYGEEEVPAGGIITGIGRVSGVECMIVANDATVKGGTYYPVTVKKHVRAQEIALQN FT RLPCIYLVDSGGANLPRQADTFPDRDHFGRIFYNQAIMSSKNITQIAVVMGSCTAGGAY FT VPAMADENIIVQRQGTIFLAGPPLVKAATGEEVSAEDLGGADLHCRRSGVTDHYALDDH FT HALHLTRKVVRSLNYQKKLDVTVEPSEEPLFPADELYGIVGANLKRSFDVREVIARIVD FT GSRFNEFKALYGDTLVTGFARIFGYPVGIIGNNGVLFSESAKKGAHFVQLCCQRNIPLL FT FLQNITGFMVGKDYEAEGIAKDGAKMVAAVSCAKVPKITVIIGGSYGAGNYGMCGRAYS FT PRFLYMWPNARISVMGGEQAATVLATVARDQRAREGKQFSSAEEAALKEPIIKRFEEEG FT NPYYSSARLWDDGIIDPVDTRLVLGLSISAALNAPIQRTDFGIFRM" XX SQ Sequence 2220 BP; 625 A; 507 C; 574 G; 514 T; 0 other; ctggcctggg agcttggtgg accaaggctg gtggtgcaag aattctggag gaacagcggc 60 ccggagctgc aaaactcagc tgcagggccg ctctctctct ttctctctct ctctttctct 120 tgggtgcttg ctatcgccat gtggggcgcg ctgaggtcag ttctgcggcc ctgcagtcgg 180 gcctccgtac cccggcagcg cgcctatcac ggggacgcgg tggcccgact gggcacccag 240 cctgactcgg gctcctccac ctaccaggag aactatgagc agatgaaagc tttagtgaat 300 caacttcatg aacgagccca gtatgtaaga ctgggaggga gtgagaaagc ccgggcgcga 360 cacacatcaa gaggaaaact gttacccaga gaccgaatcg acaacctcat agacccaggg 420 tctccctttc tggaattctc ccagttcgca ggttacaagt tatatggcga ggaggaagtc 480 cctgcaggtg gcatcatcac aggcattggg cgagtgtctg gagtagaatg catgattgtg 540 gctaacgatg ccaccgtcaa aggaggcacc tactacccag tgacggtgaa aaagcacgtt 600 cgggcacaag agatcgcact gcagaacagg ctcccatgca tctatctggt tgactcagga 660 ggggccaact tacctcggca agcagacacc tttccagacc gggaccactt tggccgcata 720 ttctataatc aagctattat gtcttctaaa aatatcacac agatagctgt ggtcatgggc 780 tcctgtacgg caggaggtgc atatgtgccg gccatggctg atgaaaacat cattgtacaa 840 agacagggta ctatcttctt ggctggacca cccttggtga aggcagctac cggcgaagag 900 gtgtccgctg aggatctcgg aggtgctgac ttgcactgca gaaggtctgg ggtcactgac 960 cactatgctt tggatgacca ccacgccctt cacttgacaa ggaaggttgt gaggagtctc 1020 aattatcaga agaaactgga tgttaccgtt gaaccttctg aagagccctt gttccccgca 1080 gatgaattgt atgggatagt cggtgcgaac cttaagagga gctttgatgt ccgagaggtc 1140 attgctagaa tcgtcgatgg aagcagattc aatgagttca aggccttgta tggagacacg 1200 ctcgtcacag gattcgctcg aatatttggg tacccagtag gcatcattgg aaacaatgga 1260 gttttgtttt ctgaatctgc caaaaagggc gctcacttcg tccagctgtg ctgccaaaga 1320 aatatccccc tgctgtttct ccagaacatc actggattca tggttggtaa agactatgaa 1380 gccgaaggga ttgccaagga tggcgccaag atggtagccg cagtatcctg tgccaaagtg 1440 cctaagataa ctgtcataat cgggggatca tatggggctg gaaactacgg aatgtgtggc 1500 agagcatata gtccaagatt tctctacatg tggccaaatg ctcgcatctc agtgatggga 1560 ggagagcagg cagccaccgt gttagccacg gtggcgagag accagagagc ccgtgagggg 1620 aagcagttct ccagtgcaga ggaggcagct ttgaaagagc ccatcatcaa gaggttcgaa 1680 gaggaaggga acccttacta ttccagtgca aggctgtggg atgatgggat tatcgacccc 1740 gtggacacca ggctggttct gggactcagc atcagtgcag ccctcaatgc gcccatccag 1800 aggacagact ttggcatctt caggatgtaa cccagatacg gaacgtgttg ccacagctgt 1860 aataaaaatt aacacgtgtg actagcctta aaacttgaga tccactgggc atttgctggc 1920 acaggaattc ttttcttaac agtatgatgt atgggttttt ttttttttaa ttgtaaaaat 1980 cagtgagtat tctgcttgat gagctttgat ttgtcaaaaa tttttcttac agacacttct 2040 catggctcat tttttaccac ccataaaatg aagtgaccga ttttgcaatt atccttttga 2100 gaaccacaaa cagtttgaaa aataaatctc tctaatctat gcaaaaaaaa aaaaaaaaaa 2160 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2220 // |
|