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EBI DbfetchID BC083522; SV 1; linear; mRNA; STD; VRT; 2470 BP. XX AC BC083522; XX DT 02-OCT-2004 (Rel. 81, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 7) XX DE Danio rerio glycerol-3-phosphate dehydrogenase 1-like, mRNA (cDNA clone DE MGC:92580 IMAGE:5913019), complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2470 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2470 RG NIH MGC Project RA ; RT ; RL Submitted (01-OCT-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000004754; Danio_rerio. DR Ensembl-Gn; ENSDARG00000007714; Danio_rerio. DR Ensembl-Gn; ENSDARG00000008788; Danio_rerio. DR Ensembl-Gn; ENSDARG00000036820; Danio_rerio. DR Ensembl-Gn; ENSDARG00000040024; Danio_rerio. DR Ensembl-Gn; ENSDARG00000060751; Danio_rerio. DR Ensembl-Gn; ENSDARG00000070203; Danio_rerio. DR Ensembl-Gn; ENSDARG00000074706; Danio_rerio. DR Ensembl-Gn; ENSDARG00000075883; Danio_rerio. DR Ensembl-Gn; ENSDARG00000076401; Danio_rerio. DR Ensembl-Tr; ENSDART00000017798; Danio_rerio. DR Ensembl-Tr; ENSDART00000017902; Danio_rerio. DR Ensembl-Tr; ENSDART00000021037; Danio_rerio. DR Ensembl-Tr; ENSDART00000053463; Danio_rerio. DR Ensembl-Tr; ENSDART00000058550; Danio_rerio. DR Ensembl-Tr; ENSDART00000085943; Danio_rerio. DR Ensembl-Tr; ENSDART00000089231; Danio_rerio. DR Ensembl-Tr; ENSDART00000097333; Danio_rerio. DR Ensembl-Tr; ENSDART00000102844; Danio_rerio. DR Ensembl-Tr; ENSDART00000110126; Danio_rerio. DR Ensembl-Tr; ENSDART00000111925; Danio_rerio. DR ImaGenes; IMAGp998M2013152Q. DR ImaGenes; IRAKp961A24180Q. DR ImaGenes; IRBOp991H0746D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 180 Row: a Column: 24 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 53734350. XX FH Key Location/Qualifiers FH FT source 1..2470 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="Sugano SJD adult male" FT /clone="MGC:92580 IMAGE:5913019" FT /tissue_type="Whole body, adult male" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2470 FT /gene="gpd1l" FT /note="synonyms: zgc:92580, wu:fi13g03, wu:fi45b08" FT CDS 91..1146 FT /codon_start=1 FT /gene="gpd1l" FT /product="glycerol-3-phosphate dehydrogenase 1-like" FT /db_xref="GOA:Q5XIZ6" FT /db_xref="HSSP:1X0X" FT /db_xref="InterPro:IPR006109" FT /db_xref="InterPro:IPR006168" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR011128" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017751" FT /db_xref="UniProtKB/Swiss-Prot:Q5XIZ6" FT /db_xref="ZFIN:ZDB-GENE-041010-220" FT /protein_id="AAH83522.1" FT /translation="MAAPLKVCIVGSGNWGSAIARIIGSNAQKLQCFATTVKMWVYEEM FT VNGKKLSEIINTEHENVKYLPGYKLPENVVAVPQLRDAADGADLLVFVVPHQFIRKLCD FT EMMGCVSERARGITLIKGIDEGPEGLKLISDIIREKMGIDVSVLMGANIANEVAAEKFC FT ESTIGSKVLENGLLFKDLLQTPNFRITVVDDADTVELCGALKNIVAVGAGFCDGLQCGD FT NTKAAVIRLGLMEMIAFAKLFSKDDSVSSATFLESCGVADLITTCYGGRNRRVAEAFAK FT TGKSIEELEKEMLNGQKLQGPLTSAEVYHILKQKGLVEKFPLFTAVYQICFEDKPVRDM FT ITCLQSHPEHL" XX SQ Sequence 2470 BP; 738 A; 494 C; 532 G; 706 T; 0 other; gaaaaaaaac tgctcgactt tgttgtatta ttacctgtat tgtttactta aaacatttat 60 caactaactt agttgtttgc aaacgtggtt atggctgctc cgctgaaagt atgcattgtc 120 ggttccggta actggggctc tgcgattgcg agaattattg gcagcaatgc acagaaactc 180 cagtgctttg ccaccacagt caagatgtgg gtgtatgaag aaatggtcaa tggcaaaaag 240 ctctccgaga tcatcaacac agagcacgag aacgtcaagt acctgccagg atacaaactc 300 ccagagaatg tggttgcagt gccacagctt cgggacgccg cagacggtgc agatcttttg 360 gtttttgtgg ttcctcacca gttcatccgg aaactgtgcg atgagatgat gggctgtgtt 420 tcagagaggg ctcgtggaat tactctaatc aaaggcatcg atgaaggacc agaaggacta 480 aagctcatct cggacatcat tcgggagaaa atgggcatcg atgtcagtgt cctgatgggg 540 gccaatattg caaacgaagt agcagctgaa aagttctgtg aaagcaccat tggcagcaaa 600 gtgttagaga atggcctctt gttcaaagat ctcctgcaga cgcctaactt caggatcact 660 gtggtggatg atgctgacac agtggagctc tgtggagccc tcaagaacat tgtagcagtg 720 ggcgcaggtt tctgtgatgg tctgcagtgc ggagacaaca ccaaagcggc cgttattcgc 780 ctgggtttga tggagatgat cgctttcgcc aaacttttca gcaaagacga ctctgtgtcc 840 tctgccacgt tcctagagag ctgcggcgtg gcagacctca tcaccacctg ctatggagga 900 cgaaaccgac gcgtcgcaga ggcttttgcc aagaccggga agagcattga ggaactggag 960 aaggagatgt taaatggaca aaagcttcag ggaccgttga cttctgctga ggtctaccat 1020 atcctcaaac agaagggcct ggtggagaag ttccccctgt tcacggctgt ttatcagatc 1080 tgttttgagg acaaaccagt acgagacatg atcacctgtc tgcagagcca tccagagcac 1140 ttgtgaggaa aaaaacctca gtgtcctcct gttaggtggt cctacctcta atacttctca 1200 tttttacatt gatatactca tgaattgtta taccttggag ggatagttca cccaaaattg 1260 agtttaggta atttttcccc actcagtaga acattaaagt tgaacatcta ctgttagtga 1320 gtccaaaaaa cctatgcagg gaaaacaaaa ataataccca tggttctgga caatacaatg 1380 aggtcttata aagcaaaatg attagtttct gcaagacatt agcattatta catttgaatc 1440 caaatagata ttttgaaaaa tgttgaagtt tgaacagacg atggtcacca ttgactgcaa 1500 aagtgttgaa aaaaatacta tgaaagttaa ttgtggccat cgtctggaag tggaagtcaa 1560 tagtgaccag tcgatttagt agtaaacttc tcatttaatc tatcataacg agccgcaggt 1620 attaatttac ttttacctgt gtatgttctt tgactctcaa agtgacaatg gaattgactt 1680 gcgttttctg aatcaccttg atttcagctg aaaccagctt gaatgttcaa ctaaaaataa 1740 aaaaaggtgt gaaggtgaat aaattggcag agaattttcc attttggatg aactatccct 1800 ttaagctttt cttttcgtcc aaggtctagg tctacactaa tggttaggct tgaactcagg 1860 ggtttgtttc caacccaaca gcttttgtta ttattacatg acattttttt aataggggat 1920 cacgtgttat tccatttaag ccgttatgca gcttttaact gttttctctc tgtctgactg 1980 ccctcttgtg gatgatccac aattaaacct cactgacaga cgagatcaaa tggctctttt 2040 ttaaatgacc attgagatct aactataaag actcgcactc catgtccaca tcaagagcaa 2100 aacgacacga ccagaatgcc tcaattatat ttgaccatct tgtagaacca gcattataca 2160 actttcctta agaaaacctg agagttttta atacttagtt tgacccaagg gcacaattta 2220 gttataaaac gaagtaaact attcatattt tttattttaa cgactgtgtt gatgaatgct 2280 aaactgccac ttaatgcgta ttaacacatt agattaaagg aactcatttt acaactcctc 2340 cagagttaaa acagttgagt tttaacattt ataattcagc caatctccgg gtctggcttt 2400 tagcttagct tggcataaag cattgaattg gattagacca ttagcatctc atgaaaaaaa 2460 aaaaaaaaaa 2470 // |
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