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EBI DbfetchID BC081981; SV 1; linear; mRNA; STD; ROD; 2859 BP. XX AC BC081981; XX DT 03-SEP-2004 (Rel. 81, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 8) XX DE Rattus norvegicus acid phosphatase-like 2, mRNA (cDNA clone MGC:94167 DE IMAGE:7128571), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-2859 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2859 RG NIH MGC Project RA ; RT ; RL Submitted (01-SEP-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000020803. DR Ensembl-Gn; ENSRNOG00000012480; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000017085; Rattus_norvegicus. DR ImaGenes; IMAGp998M1715024Q. DR ImaGenes; IRAKp961C10184Q. DR ImaGenes; IRBPp993G0213D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Howard Jacobs CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 184 Row: c Column: 10 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 56090420. XX FH Key Location/Qualifiers FH FT source 1..2859 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_236" FT /clone="MGC:94167 IMAGE:7128571" FT /tissue_type="Kidney, rat (Brown Norway)" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..2859 FT /gene="Acpl2" FT /note="synonym: MGC94167" FT CDS 97..1539 FT /codon_start=1 FT /gene="Acpl2" FT /product="acid phosphatase-like 2" FT /db_xref="GOA:Q66H78" FT /db_xref="InterPro:IPR000560" FT /db_xref="UniProtKB/Swiss-Prot:Q66H78" FT /protein_id="AAH81981.1" FT /translation="MLYRNRFLVLLALAGLLAFLSLSLQFFHLIPVSTTKNGGSSKSRK FT RIMPDPVTEPPTVDPVYEALLYCNIPSVAEHSMEGHAPHHYKLVSVHVFIRHGDRYPLY FT AIPKTKRPEIDCTLVASRKPYHPKLEAFVGHMLKGSGASFESPLGSLPLYPNHPLCEMG FT ELTQTGVVQHLQNGQLLRDIYLRKHKLLPNNWSSDQLYLETTGKSRTLQSGLALLYGFL FT PEFDWKKVYFKHQPSALFCSGSCYCPLRNQYLEKEQRRQYLLRLKNSDLERTYGEMAKI FT VDIPTKQLRAANPIDSMLCHFCHNVSFPCSRSGCLGMEHFKVIKTHQIEDERERHEKLL FT YFGYSLLGAHPILNQTVNRMQRAALGWRDELFTLYSAHDVTLSPILSALGLLEARFPRF FT AARLVFELWQDRQKPSEHSVRILYNGADVTFHTSFCHDFHKHSPKPMCPLENLVRFVKR FT DMFVALDGSSTNYYDACHGEGA" XX SQ Sequence 2859 BP; 699 A; 746 C; 716 G; 698 T; 0 other; cggagaaccc tacgcagagc aacggaggcc cggaccgtag gcggacaggc tccggattag 60 aggtgaaacc atgaagagaa cgtagaacac gcaataatgc tttaccgcaa tcgcttcttg 120 gtgctgctgg ccctggctgg gctgctggct ttcctgagcc tcagcctgca gttctttcat 180 ctgatcccag tgtccaccac aaagaatggc ggaagcagca agagccggaa gaggatcatg 240 cctgacccag tgacagagcc ccccacggta gacccggtct atgaagctct tctgtactgc 300 aacattccga gtgtagccga gcacagcatg gaaggtcatg ccccgcatca ttataagctg 360 gtctccgttc acgtgttcat ccgccatggg gacaggtacc cactgtatgc cattcccaaa 420 acgaagcggc cagaaatcga ctgcactcta gtggccagca ggaagccata tcaccctaaa 480 ctggaagctt tcgttggtca catgctgaaa ggttccggag cctcttttga aagcccctta 540 ggttccctgc ctctctatcc taaccatcct ctgtgtgaga tgggggagct cacgcagaca 600 ggagtcgtgc agcatctgca gaatggccag ctgctgaggg acatctatct gaggaaacac 660 aagcttctgc cgaacaactg gtcctcagac cagctttacc tagagaccac ggggaagagc 720 cgcaccctgc agagtgggct agccttgctc tatggcttcc tcccagagtt cgactggaag 780 aaggtctact tcaagcacca accaagtgct ctgttctgct ctggaagctg ctactgcccg 840 ctaagaaacc agtatctgga gaaggaacag cgacgccagt acctgctccg tctgaagaac 900 agcgacctag agaggaccta cggggagatg gccaagatcg tggacatccc caccaagcag 960 ctccgggcgg ccaaccccat cgactccatg ctctgccact tctgccacaa tgtcagcttc 1020 ccctgcagca gaagtggctg ccttggcatg gagcacttta aggtgatcaa gacgcaccag 1080 atagaggatg agcgagagag gcacgagaag ctcctgtact ttgggtactc cctcctcggg 1140 gcccacccca tcctgaatca gacggttaac cggatgcagc gcgctgcctt gggctggagg 1200 gacgagctgt tcaccctcta ctctgctcac gacgtcaccc tgtcacccat cctcagtgcc 1260 ttgggtcttt tggaagccag gttcccaagg tttgctgcca ggctggtttt tgagctctgg 1320 caagaccgtc aaaagcccag cgagcattcc gtccggattc tttataatgg ggctgacgtc 1380 accttccaca cctccttctg ccatgacttc cacaagcact ctcccaagcc catgtgtcct 1440 ctggagaact tggtccgctt tgtcaaaagg gatatgtttg tagccctgga tggcagcagt 1500 actaactatt acgatgcatg ccacggggaa ggggcctaag aggtactcag cacagccgcg 1560 tctgcttgct ggttctgtct gttgctaaga tgtcaaggta tggagttcta acggtgcaga 1620 ttaggtgggg tgatcatgct catgggcgag acaaacggga acacataccg tatactactt 1680 ggtacaaaat agccggttca cagaggaagg aaggcacgtt ctcacagccg tgcgcagctt 1740 agaatgccag cattcggctc agcactcaca gttgccaagc caaccttata taacttttgg 1800 cctgccatga accagcaaac ctctgccaaa gtcctcttaa tctcggacat tcaccttcac 1860 cttgtgtgga aattttccca gaggaacgag ttcaaagtgt gcccggcagc ctttgtctgg 1920 agggaccaca agatcactgt cttagacttg gtagccctaa aggtcacgga gaatctctcc 1980 ctgtcagatc ttctcggctg tgcgctggtt ggccatatgt aagtgggcag aataggcggc 2040 agccagctct ggccgctggc tgtttgctga ctcaccttga agagcagcct gtgccgttgg 2100 actcccgctc cttgggagcc agcggggccg cagtgcggca ggtcctttgg gagcgtctgc 2160 tagaagcaca gggttgggtc aatggccctg ggtgagaaag cgcgtaggaa taactattac 2220 agcacttgat gctcatgagg atcatggcac aaaatagctt tacgtgtgtc ttaggtgttt 2280 gtctgctgta gtctactggc tgcaaactgc tgggcttttg tatcccattt agtattttta 2340 tagtctagga aaatattttc tgagaccagt tttagatgtg ttcagattcc tatagaaata 2400 ttcaatttac tgcacctgct tggtggttgg aaggaggcca aaagctcaat ttggacactc 2460 tctctttttt ccccctccga aaataaataa ctaatgactc attccttttg acaagctgta 2520 gaattaggtc catttttaaa ccattttcgt ctatttcaaa tgccaaattc caatcgattt 2580 ttaaagaggt ttctagaaaa aaattgttat tccatagtta aataatcttt ctaaaatgtt 2640 ttatatatca ggcgtgatca caactgactg cgtggttcct cggtcaatgg tgctagctcg 2700 ttctgaagac agggccatgt gggcggcatt ggttctgcag catcggcacg ccagccttcc 2760 tcttcctctg tgtctggtgt tgcattggaa cacgttttgt ttttagaaat aaaaaatttt 2820 gaattcttaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa 2859 // |
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