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EBI DbfetchID BC081683; SV 1; linear; mRNA; STD; VRT; 1601 BP. XX AC BC081683; XX DT 03-SEP-2004 (Rel. 81, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE Danio rerio zgc:92867, mRNA (cDNA clone MGC:92867 IMAGE:7117718), complete DE cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1601 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1601 RG NIH MGC Project RA ; RT ; RL Submitted (01-SEP-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000019338; Danio_rerio. DR Ensembl-Gn; ENSDARG00000022261; Danio_rerio. DR Ensembl-Gn; ENSDARG00000044752; Danio_rerio. DR Ensembl-Gn; ENSDARG00000045870; Danio_rerio. DR Ensembl-Gn; ENSDARG00000063415; Danio_rerio. DR Ensembl-Gn; ENSDARG00000070651; Danio_rerio. DR Ensembl-Gn; ENSDARG00000073767; Danio_rerio. DR Ensembl-Gn; ENSDARG00000076824; Danio_rerio. DR Ensembl-Tr; ENSDART00000011706; Danio_rerio. DR Ensembl-Tr; ENSDART00000034112; Danio_rerio. DR Ensembl-Tr; ENSDART00000067414; Danio_rerio. DR Ensembl-Tr; ENSDART00000092643; Danio_rerio. DR Ensembl-Tr; ENSDART00000101967; Danio_rerio. DR Ensembl-Tr; ENSDART00000103943; Danio_rerio. DR Ensembl-Tr; ENSDART00000110647; Danio_rerio. DR Ensembl-Tr; ENSDART00000110919; Danio_rerio. DR Ensembl-Tr; ENSDART00000112210; Danio_rerio. DR ImaGenes; IMAGp998I1214996Q. DR ImaGenes; IRAKp961N13180Q. DR ImaGenes; IRBOp991E0749D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: John Ngai, Univ of CA, Berkeley CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 180 Row: n Column: 13 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 51859405. XX FH Key Location/Qualifiers FH FT source 1..1601 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_4" FT /clone="MGC:92867 IMAGE:7117718" FT /tissue_type="Brain" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..1601 FT /gene="zgc:92867" FT /note="synonyms: fj36e06, wu:fj36e06" FT CDS 324..1403 FT /codon_start=1 FT /gene="zgc:92867" FT /product="zgc:92867" FT /db_xref="GOA:Q66HT8" FT /db_xref="HSSP:2CWC" FT /db_xref="InterPro:IPR005502" FT /db_xref="UniProtKB/Swiss-Prot:Q66HT8" FT /db_xref="ZFIN:ZDB-GENE-040912-85" FT /protein_id="AAH81683.1" FT /translation="MMLSRFRGALVGSVLGDCIGGEFEGAVDVPLDRVLQHLSALEDDT FT RGDGILQYSDDTAMMRCVADSLLTRMTFDERDMAQRFAKEYSHSPGRGYGSGVVQVLRK FT LASPHLKDVFQPAQAQFGGRGSFGNGGAMRAVPFALAFRSRADVRKYSRFGAMLTHSCS FT LGYNGAALQALAVHLSLQGALALPKDFIDKLISEMEELEKDETAKHDAKALNLSEFPYC FT SRLHRVKELMDKTSVSIEEVISELGNGIAALQSVPTAIFCVLYCLEPQDGLPERFGGLE FT RTIAYSLALGGDTDTIACMAGAIAGAHYGIDSIPLSWQVSCEGVDEADDLARRLYDLYC FT LPQHNEDRGNNQPHTTNTD" XX SQ Sequence 1601 BP; 449 A; 357 C; 415 G; 380 T; 0 other; aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa attttaataa accgcgccat tgcagtttcc 60 aaagccttgc ttcgctattc tgtaaataaa tatgacacga ttacataaat tacgatacta 120 aaaaaacaat cgcttctgta aggttcatta tagcagtttt attggtaagt gacagcgttc 180 tggaaaaccg gatcaatcgt gatgcggttc tatttgaggt tgtgcggtgt ctcgtctgaa 240 gcgctttatt gtagtgcagc ttgtgtttat attcgagtcc ggttgtagtg atgtcagcgg 300 cggcgcgtgt cgtagcgccg gtgatgatgc tgtcgcggtt ccgcggcgcg ctggtcggct 360 cggtactcgg cgactgtatc ggcggagagt ttgaaggcgc tgtggatgtg cctctggatc 420 gagtcctgca gcatctcagc gctctggagg acgacacacg gggcgacgga attcttcagt 480 acagcgatga caccgccatg atgcgatgcg ttgcagattc gctcctcacc aggatgacat 540 tcgatgagcg agacatggct caaagatttg caaaggagta tagtcactct ccagggcgag 600 gttacggctc gggtgtcgtt caggttctga gaaagcttgc gtcaccccat ctgaaggatg 660 tcttccagcc tgcacaggct cagtttggtg gccgtggatc tttcggcaat ggaggagcca 720 tgagagcagt gcccttcgct ctggccttca gaagtcgtgc tgatgtccgc aagtactcgc 780 ggtttggcgc tatgctaaca cactcatgct ctttgggcta caatggggca gcgctgcagg 840 cccttgctgt ccatctgtcg ctccagggtg ctttggctct gcctaaagat ttcatcgaca 900 aactgatctc agaaatggaa gagctggaaa aagacgaaac agccaagcat gatgctaaag 960 cgctaaattt atcagagttt ccatattgtt cacgtttgca cagagtgaaa gaactcatgg 1020 acaaaaccag cgtgagcatc gaggaggtca tatctgaact ggggaacggc atcgctgcat 1080 tacagtctgt gcccactgcc atcttctgtg tgctgtattg tttggagccc caggatggcc 1140 tgccggagcg attcggagga ctggagagga cgatagccta tagcttggct ctgggtggcg 1200 acacagacac catcgcatgt atggcaggag cgatcgcagg ggcacattac ggcatcgact 1260 ccattcccct gagctggcag gtcagctgtg aaggggtgga cgaggctgat gatttagcaa 1320 ggcgtctgta tgatctctac tgccttccac agcacaatga ggacaggggg aacaatcagc 1380 cgcacaccac aaacactgac tgagccacta cagtgccaca cgcataagaa aaactttacc 1440 tggcacatcg tgtccaatgc accatcatct gtgtttataa aattgtgaat cttctcgtgc 1500 aaaattgttt acaataaaaa gaacagaatg gtaccctttt attggtaaaa aaaaaaaaaa 1560 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a 1601 // |
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