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EBI DbfetchID BC081393; SV 1; linear; mRNA; STD; VRT; 1167 BP. XX AC BC081393; XX DT 11-SEP-2004 (Rel. 81, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 5) XX DE Danio rerio zgc:101723, mRNA (cDNA clone MGC:101723 IMAGE:7228620), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1167 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1167 RG NIH MGC Project RA ; RT ; RL Submitted (01-SEP-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000000472; Danio_rerio. DR Ensembl-Gn; ENSDARG00000018234; Danio_rerio. DR Ensembl-Gn; ENSDARG00000019081; Danio_rerio. DR Ensembl-Gn; ENSDARG00000071463; Danio_rerio. DR Ensembl-Tr; ENSDART00000000486; Danio_rerio. DR Ensembl-Tr; ENSDART00000016394; Danio_rerio. DR Ensembl-Tr; ENSDART00000064835; Danio_rerio. DR Ensembl-Tr; ENSDART00000103800; Danio_rerio. DR Ensembl-Tr; ENSDART00000105677; Danio_rerio. DR ImaGenes; IMAGp998B1015146Q. DR ImaGenes; IRAKp961K24197Q. DR ImaGenes; IRBOp991E1156D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: John Ngai, Nancy Freeman, NIDCD CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 197 Row: k Column: 24 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 51980716. XX FH Key Location/Qualifiers FH FT source 1..1167 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_14" FT /clone="MGC:101723 IMAGE:7228620" FT /tissue_type="Olfactory epithelium" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..1167 FT /gene="zgc:101723" FT CDS 19..1023 FT /codon_start=1 FT /gene="zgc:101723" FT /product="zgc:101723" FT /db_xref="GOA:Q642M9" FT /db_xref="InterPro:IPR000683" FT /db_xref="InterPro:IPR004104" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q642M9" FT /db_xref="ZFIN:ZDB-GENE-040927-25" FT /protein_id="AAH81393.1" FT /translation="MALRWGICSAGKISHDFTVALRTLQAEQHQVVAVAARELAHAQEF FT AQKHSIPRAYGSYEELAEDPEIDVVYVGTIHPHHLRVGLLFMNAKKNVLCEKPLAMNLK FT EVQQMISAARRSDVFLMEAVWTRFFPASLEISRLLSQNAVGQVKLVRADFGAALLGVPR FT AVQKHLGGGALLDIGIYCIQFVLMVFNGEKPEQIQASGVCLDTGVDEAMVVTLKFSGHR FT LAVCTCTVAAELPNEALIVGTEATIKVPAHMWCPTTLLVNGVETQFPVPDPHLPLNFIN FT STGMRYEAEEVRRCVLAGLKESSRMSHADSALLADIMDEARRQVGVVYSQDSQ" XX SQ Sequence 1167 BP; 280 A; 306 C; 336 G; 245 T; 0 other; acacacacac tcggcatgat ggcgctcaga tgggggatct gcagcgctgg aaagatcagt 60 catgacttca ctgtggccct gaggactcta caagcagaac aacaccaggt ggtggccgtg 120 gctgcgcgtg agttggcgca tgcgcaggag tttgcacaga agcacagtat cccgcgcgca 180 tacggcagct atgaggagct ggctgaagat ccagagatcg acgtggtgta cgtgggcacc 240 atccaccctc atcacctgcg ggtcggcctg ctcttcatga acgctaagaa aaacgtgctg 300 tgtgagaaac ccctggccat gaacctgaag gaggtccagc agatgatctc cgcagccagg 360 aggagcgacg tcttcctcat ggaggcggtg tggacgcgct tcttcccagc ttcgctggag 420 atcagtcgtc tgctctccca gaatgccgtg gggcaggtga agctggtgcg ggcagacttc 480 ggcgctgctc tccttggtgt gccgcgcgcc gtacagaagc atctgggtgg aggagctctg 540 ctggacatcg gcatctactg cattcagttt gtgctcatgg tgttcaatgg agagaaacca 600 gagcagatcc aggccagcgg agtgtgtctg gacacgggtg tggacgaggc gatggtagtg 660 acactgaagt tctctggaca ccgattggcc gtctgtacct gcaccgtcgc cgctgagctg 720 cccaatgaag cgctgatcgt tggcactgaa gcaaccatta aggtcccggc tcatatgtgg 780 tgtccgacga ctctgctggt caacggtgtg gagactcagt tccctgttcc tgatccacat 840 ctgccgctca acttcatcaa cagcaccggc atgagatatg aagctgagga agtgcggcgc 900 tgtgtactcg cagggctgaa ggaaagctct cgaatgtctc acgctgactc cgccctcctt 960 gctgacatca tggatgaagc ccgcaggcag gtgggtgtgg tctacagcca ggacagccaa 1020 tgagctccca ccactactgc tgctcattaa cataaaactg tgaaacagac caataaaaga 1080 cttctgctgc tctttttttt atgaatgaac tcaggctcag aataaaaccg gaagtttaat 1140 actgtaaaaa aaaaaaaaaa aaaaaaa 1167 // |
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