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EBI DbfetchID BC081270; SV 1; linear; mRNA; STD; VRT; 2983 BP. XX AC BC081270; XX DT 01-SEP-2004 (Rel. 81, Created) DT 27-MAY-2005 (Rel. 83, Last updated, Version 3) XX DE Xenopus laevis hypothetical protein LOC446948, mRNA (cDNA clone DE IMAGE:7011549), partial cds. XX KW . XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-2983 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2983 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2983 RA Klein S., Gerhard D.S.; RT ; RL Submitted (30-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998E1914720Q. DR ImaGenes; IRAKp961M03169Q. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, CC Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, CC Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, CC Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, CC Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie CC Schein, Asim Siddiqui, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 169 Row: m Column: 3 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Similarity but not CC identity to protein. XX FH Key Location/Qualifiers FH FT source 1..2983 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Kid1" FT /clone="IMAGE:7011549" FT /tissue_type="Kidney, adult Xenopus" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT gene <1..2983 FT /gene="LOC446948" FT CDS <1..2032 FT /codon_start=2 FT /gene="LOC446948" FT /product="LOC446948 protein" FT /db_xref="GOA:Q498K0" FT /db_xref="InterPro:IPR013781" FT /db_xref="UniProtKB/Swiss-Prot:Q498K0" FT /protein_id="AAH81270.1" FT /translation="GTVPAGSRRAPGCGEGMFILCLALLLAPGAPAQYSVDDFGGLGRM FT FDGIGAISGGGATSRLLVNYPEPQRTEILDYLFKPNFGASLHIFKVEIGGDAQTTDGTE FT PSHMHYPDDQNYFRGYEWWLMKEAKKRNPAIKLIGLPWAFPGWIGYGKNWPYDFPDVTA FT YYVVSWIIGAKQYHNLDIDYIGIWNERAYDIKYIKVLRHTLDRLGLTNVGIIAADGDWG FT IAHDVLIDPYLNEAVQVIGAHYPGTHAAQDAIQTGKTLWASEDYSTYNDEVGGGCWARI FT LNQNYVNGNMTSTISWNMVASYYEQLPFGLEGLMTAKEPWSGNYVVSTPIWITAHTTQF FT TQPGWYYLRTVGHLDKGGSYVALTDRLGNLTVIIETMSHNNSICIRPPLPEYNVSAQNA FT TFYLQGSFQNLQELQVWYSNLDINNTKPVTFKKLTPVKVQNGSFTLQLGVNEVYTVTTL FT LTGQKGSFPDPPKSKPFPLKYKDDFSVRNPPFSEAPYFADQSGVFEYFTNTSDPGDHVF FT TFRQVLTQRPITWASDANQAISVIGNYQWSNITVTCDIYIETVETGGVFVAARVDQGGS FT PTDRAKGIFFWVFADGTYKVTGDLIGEIVLCKGLAGVRARSWHTLTLHVDGTNASGLLN FT GSPLWKEVVTGGPLHGWAAIGTSSFEFTQFDNFMIEAKDPE" XX SQ Sequence 2983 BP; 853 A; 597 C; 668 G; 865 T; 0 other; ggggacagtg ccggctggtt ccaggagggc tccaggttgt ggtgagggca tgtttattct 60 ctgcctggcg ttgctgttgg ccccaggagc cccggcccag tattcagtag atgatttcgg 120 agggcttggc cgcatgtttg atgggatcgg agcaatcagc ggaggaggtg caacatcccg 180 tcttcttgtt aactacccag aaccacaaag aactgagatc ctggattatt tgttcaagcc 240 aaattttggt gcctctttgc acatcttcaa ggttgaaatt ggaggagatg cacaaacaac 300 agatggaaca gagccatctc atatgcacta ccccgatgat cagaactact tccgaggtta 360 tgaatggtgg ttgatgaaag aggcaaagaa gcgaaatcct gcaattaaac tcataggttt 420 accttgggca tttcctggct ggatcggtta tggcaaaaac tggccttatg attttcctga 480 tgtgacggct tactatgttg tgtcatggat tataggcgcc aagcaatatc ataatttaga 540 tatagactac attgggattt ggaatgagag agcctatgac atcaaataca taaaggttct 600 gcggcatact ttggacaggc tgggtttaac gaacgttggc atcatcgctg ccgatggaga 660 ctgggggatt gcgcatgacg tgctaattga tccttatctt aatgaggctg tacaggtcat 720 aggtgctcac tatcctggaa cccatgcagc acaagatgct attcagacag gaaagacgct 780 ctgggcctct gaagattaca gcacttacaa tgatgaggtt ggtggaggtt gctgggctcg 840 gattctgaac caaaactatg tgaatggaaa catgacttcg actatatctt ggaatatggt 900 ggcgagttac tatgaacaat taccttttgg tttggaaggg ctgatgacag ccaaggagcc 960 atggagtgga aattatgtgg tatcaacacc catatggatt actgcacaca ctacccagtt 1020 cacacagcca ggctggtact atcttagaac ggttgggcat ttagacaaag gtggaagcta 1080 tgtagcactg actgaccggc tgggaaacct aaccgttatc atcgagacca tgtcacataa 1140 caactctatc tgcatccgtc ctccactgcc agagtataat gtttcagctc agaatgctac 1200 gttctacctt caaggctcct ttcaaaacct gcaagaactg caggtttggt attcaaatct 1260 ggacatcaac aacaccaaac ctgtcacgtt caaaaagctg actccagtaa aggtacaaaa 1320 tggttctttc acactgcagc tgggggtaaa tgaagtttac acagtaacaa ccctgttgac 1380 tggacagaag ggttcattcc ctgatccacc caaatccaaa cctttccctc taaaatacaa 1440 ggatgacttc agtgtcagaa accctccttt ttcagaggcc ccttattttg cagaccagtc 1500 tggtgtattt gaatatttca caaatacctc tgacccaggt gatcatgtct tcacctttcg 1560 ccaagttctt actcagcgcc caatcacttg ggcatcagat gctaaccaag ccattagtgt 1620 gattggtaac taccaatggt ccaatattac agtgacatgt gacatctaca ttgagactgt 1680 ggaaactgga ggggtgtttg ttgctgctag agttgatcag ggaggctcac caactgacag 1740 ggcaaagggt atatttttct gggtgtttgc cgatggcacc tataaagtca ctggggattt 1800 aattggggaa atagttctgt gcaaggggct ggcaggtgtt cgtgctagaa gctggcatac 1860 actgaccctt catgttgatg gtactaatgc atctgggctg ctaaatggaa gtcccttgtg 1920 gaaagaagtt gtgactggag gacctttgca tggctgggct gccattggga caagctcctt 1980 tgaatttaca cagtttgata actttatgat tgaggccaaa gatcctgaat gagccacata 2040 ccaagtgcct tataagtcct ctctactgac acaacgtatt caagcaatga atgttaactg 2100 gggatatgca gaaaaatatt tttctaacgc accagatttt agaagcattt cctaaaaaaa 2160 tgctgcttgc actgaatgat acagcccttt cacttatttt cattggtatt taaacagtgt 2220 attttaaccc cttaaggagg taaattattt tgtctataaa aaacgggtac ttaggagatt 2280 aattcatagt tgaaattgca aaactttctg gacaacgatg gctttaagtt cttatctgga 2340 ttcaagggct tttttttcta ctggcacagg ataaaaaggt tttcacctac tttactgaaa 2400 caggacagcc tggtttgtca gtaaaaaagt aaataaattg ttcatgcttt tataacttac 2460 tatatgtggg tttttcagtg cctaaacatt attaccattg ttacctgcag taaatgcagc 2520 gagtcgttgt atcattgtag gtatgtttct tgtatagaca catctttgca aattaaatgt 2580 gtaaactcac agctcccata tttgctagta ttagaaaatg attttctgga atgcttaccc 2640 tttgggagta attttgggct tttggcaaag atacagcaga caggcaacac tgtttatatc 2700 agagctatct tagtgccagg aaggttggat gagattgtat cttggacatt actgtagtat 2760 gtttaactaa agcatctgtt ttacagtaaa taatatacca cttaatggtg gccagtgcca 2820 cagtccacag aatagtcact ccagcatctc tcttttcctg ttagagaaga cagaaagtat 2880 aaagctcttt ctgcatattt gattgactat aattttattc tagtcctacg atcttaaaaa 2940 taatcattta ataaatgcag tgaccttaaa aaaaaaaaaa aaa 2983 // |
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