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EBI DbfetchID BC080228; SV 1; linear; mRNA; STD; VRT; 1130 BP. XX AC BC080228; XX DT 18-AUG-2004 (Rel. 80, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 4) XX DE Danio rerio similar to beta-1,4-galactosyltransferase, mRNA (cDNA clone DE IMAGE:7149167), partial cds. XX KW . XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1130 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1130 RG NIH MGC Project RA ; RT ; RL Submitted (16-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000002634; Danio_rerio. DR Ensembl-Tr; ENSDART00000114054; Danio_rerio. DR ImaGenes; IMAGp958G213312Q. DR ImaGenes; IRALp962J1660Q. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Genome Institute of Singapore CC cDNA Library Preparation: S. Mathavan, Chia-Lin Wei, and Yijun CC Ruan, Genome Institute of Singapore CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAL Plate: 60 Row: j Column: 16 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 51329811. XX FH Key Location/Qualifiers FH FT source 1..1130 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /strain="Singapore local strain" FT /mol_type="mRNA" FT /clone_lib="GISZF001_ra" FT /clone="IMAGE:7149167" FT /tissue_type="Embryo, 7 different stages (from just FT fertilized embryos to 72 hours just hatched baby fish)" FT /note="Vector: pDNR-LIB" FT /db_xref="taxon:7955" FT gene 1..>1130 FT /gene="LOC564857" FT CDS 172..>1130 FT /codon_start=1 FT /gene="LOC564857" FT /product="LOC564857 protein" FT /db_xref="GOA:Q68EK0" FT /db_xref="InterPro:IPR003859" FT /db_xref="UniProtKB/TrEMBL:Q68EK0" FT /db_xref="ZFIN:ZDB-GENE-050417-236" FT /protein_id="AAH80228.1" FT /translation="MSESVGFFTKACVVLVLLCGLHLIVALIFYLSESPLAKFRNYRHI FT SFISDMVNSQTHGELGQADNETLDVAVYKRIYNNETVIIGDVEKPAEVLESCPETSPLL FT VGQLRVEFSTPVDFNLVRQGNKHLTMGGRYTPTKCVALQKVAIIIPYRNREEHLKYWLY FT YLHPILKRQLLDYGIYIIEQDGENTFNRAKLLNVGYAEALKEYDYDCFIFSDVDIIPMD FT DRNTYGCSSQPRHLSVSMDKFGFRLPYKQYFGGVSAMSKKQYEKINGFPNNYWGWGGED FT DDIFNRLSIRGMRISRPSAEIGKCKMIRHGKKKKKKKK" XX SQ Sequence 1130 BP; 338 A; 229 C; 275 G; 288 T; 0 other; gggggatctt catcaatgcc ggaaaaactg gacgtggacg gacgcgatcg ctatcacaaa 60 aactttctaa agggactacg ctggtcatcc catgaaggaa cggacagatg tgtcttagtt 120 ttaggacttt ttattcctcg tgaatgaagc ggtctctgta gttttgcgag aatgtcggag 180 tcggtgggat tcttcactaa agcatgcgtc gtgctcgtgc tgctctgcgg gcttcacctc 240 atcgtggcac tgattttcta tttatcagag tcgcctttag ctaaatttag gaattatcga 300 cacatttcat ttatctctga tatggttaat tcacaaactc acggagaatt gggacaggct 360 gacaatgaaa cacttgacgt agctgtatat aaacgtatct ataataacga gactgtcatt 420 attggtgacg tagagaaacc tgcagaagta ctggagtcgt gtcctgaaac gtcgccactt 480 ttggtgggtc aactgcgagt tgaattttcg accccggtgg attttaattt ggtgcgtcaa 540 ggcaataagc atctgacgat gggcggcagg tatacaccca ccaaatgtgt ggctctgcaa 600 aaagtggcga taatcatccc atacagaaac agagaagaac acctcaaata ctggctttac 660 taccttcacc ctatcttaaa gagacagctg ctggattatg ggatttatat catagaacag 720 gatggagaga acacattcaa cagggccaaa ctgctcaatg tgggttacgc agaggcgctg 780 aaggagtacg actatgattg tttcatcttc agtgatgtag acatcatccc tatggacgat 840 cgcaacacct atgggtgctc cagtcagccg cgccacctct ccgtctccat ggacaagttc 900 ggcttcagat tgccatataa acagtatttt gggggagttt cagcgatgag caaaaagcag 960 tatgagaaga tcaatggctt tcccaataac tactggggct ggggaggaga agatgatgac 1020 atattcaaca ggctttcaat tcgaggtatg aggatatcaa gaccaagcgc agagattggg 1080 aagtgcaaaa tgattcgtca cggaaaaaaa aaaaaaaaaa aaaaaaaaaa 1130 // |
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