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EBI DbfetchID BC080150; SV 1; linear; mRNA; STD; VRT; 1816 BP. XX AC BC080150; XX DT 18-AUG-2004 (Rel. 80, Created) DT 28-JUL-2007 (Rel. 92, Last updated, Version 7) XX DE Xenopus tropicalis GDP-mannose pyrophosphorylase B, mRNA (cDNA clone DE MGC:89813 IMAGE:7028375), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-1816 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1816 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1816 RA Klein S., Gerhard D.S.; RT ; RL Submitted (09-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998B2114764Q. DR ImaGenes; IRAKp961K24173Q. DR ImaGenes; IRBNp992H097D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Wei WU / Prof. Christof NIEHRS CC cDNA Library Preparation: Wei Wu, DKFZ CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 173 Row: k Column: 24 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 51259083. XX FH Key Location/Qualifiers FH FT source 1..1816 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="XtSt10-30" FT /clone="MGC:89813 IMAGE:7028375" FT /tissue_type="Embryo, mix of stage 10, 20 and 30, mixed FT sex." FT /note="Vector: pRKW2" FT /db_xref="taxon:8364" FT gene 1..1816 FT /gene="gmppb" FT CDS 57..1139 FT /codon_start=1 FT /gene="gmppb" FT /product="GDP-mannose pyrophosphorylase B" FT /db_xref="GOA:Q68EQ1" FT /db_xref="HSSP:1WVC" FT /db_xref="InterPro:IPR001451" FT /db_xref="InterPro:IPR005835" FT /db_xref="InterPro:IPR011004" FT /db_xref="InterPro:IPR018357" FT /db_xref="UniProtKB/Swiss-Prot:Q68EQ1" FT /protein_id="AAH80150.1" FT /translation="MKALILVGGYGTRLRPLTLSVPKPLVDFCNKPILLHQVEALVKAG FT VNHVILAVSYMSDMLEKEMKEQEKRLGIRISMSHEKEPLGTAGPLALARELLTENSDPF FT FVLNSDVICDFPFEEMVRFHKHHGKEGTIVVTKVEEPSKYGVVVYEAESGQIQRFVEKP FT QVFVSNKINSGLYIFSPAVLDRIQLRPTSIEKEIFPAMAQEGQLFAMELQGFWMDIGQP FT KDFLTGMCMYLQSVRQKHPEWLHVGPGFIGNVLVDPTAKIGQNCSIGPNVTIGPGVTVE FT DGVRIKRCTIMKGSRLHSHSWLESSIVGWSSSVGQWVRMENVTVLGEDVIVNDELYLNG FT ANVLPHKCISESVPEPRIIM" XX SQ Sequence 1816 BP; 474 A; 386 C; 490 G; 466 T; 0 other; ccggaatggt actgaggtgg aaggagtctg gtggcaagtg gagctggtag gtcaatatga 60 aggcgctaat tctcgttggt ggatatggca ctaggctgcg tcctttgaca ctgagtgttc 120 caaagccatt ggtggacttc tgtaacaaac ccatactact gcaccaagtg gaggccctgg 180 taaaggctgg agttaatcat gtgatcctcg ctgtcagcta catgtccgac atgttagaaa 240 aggagatgaa ggagcaggaa aagaggcttg ggatccgaat ctcaatgtcg catgaaaagg 300 agcctttggg tacagctggt cctttagccc tggccaggga actactaacc gagaactccg 360 acccattctt tgtcctaaac agtgatgtca tttgtgactt tccttttgag gagatggtgc 420 gattccataa acaccacggg aaagaaggaa ccattgtggt aacaaaggtg gaggaacctt 480 caaaatatgg agttgttgta tacgaggcag agtcagggca aatacagcgc tttgtggaga 540 agccacaggt gtttgtgtcc aacaagatca actcaggact gtatatcttc tccccggctg 600 tgctggatcg tattcagcta cgtccgacct ccatagaaaa ggaaatcttc cctgctatgg 660 cacaggaggg tcagttgttt gctatggagc tgcaagggtt ctggatggac attggtcagc 720 ctaaagattt cctgactggc atgtgcatgt acctccagtc tgtcaggcag aagcacccag 780 agtggcttca tgtgggacct ggctttattg ggaatgttct ggtggatccc acagctaaga 840 ttggtcagaa ctgcagcatt ggccctaatg tgactattgg ccctggtgtg actgtagagg 900 acggtgtgcg tatcaagcga tgcactatca tgaaaggatc caggctgcat tcccattcct 960 ggctcgagtc ctccattgtt ggttggagct catcagtagg acagtgggtg cgcatggaga 1020 acgtgaccgt gctgggcgag gatgtcattg ttaatgatga gctttacctg aatggagcca 1080 acgtcctgcc gcacaagtgc atctccgagt ctgtacccga gccacggata atcatgtaga 1140 agtgcaacgc tactgctcag acagcacttc gctctatttg gattgggggc tgtgaccttt 1200 attctgtgct gtccagcagt gagggttttg cgctatagta cagaggagca cagaaataaa 1260 gaagagtata atctcaggat atggcatcct ctacaatcat gggtatacag gctggcgcag 1320 tgctaagagt atggctagtt tgccagtagg catgggagtt gagggactgt ctgtcggact 1380 gtggtgcctt ggtttcttga tgagccggga caacttgctg ggaatcgggc tgttacccct 1440 ccagatgttc tgtgatataa ggagcagcct tcccaggggc ctcagatact gaaaggaact 1500 gccaaacact gtgctcagcc caactctcca acttcccata actgctgctt cttcatgggc 1560 ctagaactca gtggaaattg ccagtaatac cggtggctga aggctacaat gaatatcagg 1620 tacagtgtgc cactcccatg tctcactgca gcctgtgggt atttaatgga agcagggttt 1680 taaaaggatt taaaatgcag atttctcata cagagtgcca gatgaattta ctatgagaac 1740 tctactgtgt catttgtgtt ttaaaaaaac aaacatctta taaagaagat ttttaactac 1800 caaaaaaaaa aaaaaa 1816 // |
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