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EBI DbfetchID BC080008; SV 1; linear; mRNA; STD; VRT; 2262 BP. XX AC BC080008; XX DT 18-AUG-2004 (Rel. 80, Created) DT 27-MAY-2005 (Rel. 83, Last updated, Version 3) XX DE Xenopus laevis MGC81856 protein, mRNA (cDNA clone MGC:81856 IMAGE:7008363), DE complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-2262 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2262 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2262 RA Klein S., Gerhard D.S.; RT ; RL Submitted (09-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998A0114712Q. DR ImaGenes; IRAKp961P16161Q. DR ImaGenes; IRBHp990C1046D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, CC Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, CC Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, CC Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, CC Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie CC Schein, Asim Siddiqui, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 161 Row: p Column: 16 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..2262 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Kid1" FT /clone="MGC:81856 IMAGE:7008363" FT /tissue_type="Kidney, adult Xenopus" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT gene 1..2262 FT /gene="MGC81856" FT CDS 127..1467 FT /codon_start=1 FT /gene="MGC81856" FT /product="MGC81856 protein" FT /db_xref="GOA:Q68F37" FT /db_xref="InterPro:IPR002123" FT /db_xref="UniProtKB/Swiss-Prot:Q68F37" FT /protein_id="AAH80008.1" FT /translation="MEDFKTIACNIFIIWLTLVIVLILLPSMFGSSLGISEVYMKILVK FT VLEWATLRIQKGFKDKEKLSASNGIIQRDKSPMETEIECLRQSRSQDIREGDFELGDVF FT YFAKKGFEAIVEDEVTQRFSSEELISWNLLTRTNNNFHYVSLRVTLIWVLGLCVRYCIL FT LPLRITLATIGISWLVLGATLVGQLPNSRMKSWFSELVHLMCCRICARALSSAIQYHNK FT ENKPKKGGICVANHTSPIDIIILANDGCYAMVGQVHGGLMGIIQRAMARACPHVWFERS FT EMRDRHLVTERLREHVSDKSKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIYPVAIKY FT DPQFGDAFWNSSKNSMVSYLLRMMTSWALKCNVWYLPPVNRQDGEDAVQFANRVKSAIA FT KQGGLVELPWDGGLKRGKVKDSFKEEQQKNYSRIIAGENKSLKPTTH" XX SQ Sequence 2262 BP; 689 A; 407 C; 493 G; 673 T; 0 other; cccacgcgtc cgtgccttgt gtgcaaagtg tgttttcctt gttttgacaa attaaggatc 60 ggaggagggg aagcatatga taaagtcttc ccggaggaat ttgtatagga attgtctggt 120 atagcaatgg aggacttcaa gactattgct tgtaatatat tcatcatatg gctgacgctg 180 gttattgttc tcatcttgtt gccttcaatg tttggcagct ccctggggat ctctgaagtt 240 tacatgaaga tcctagtgaa agttttagag tgggccacgt taaggattca gaaaggattt 300 aaagataagg agaaactgtc tgcatccaat ggtatcatcc agagagataa gtccccaatg 360 gagacagaaa ttgaatgctt gagacaaagt aggagtcagg acatacggga aggagacttt 420 gagcttggtg atgtcttcta ttttgcaaaa aagggatttg aagctattgt tgaagacgag 480 gtcacgcaga ggttttcctc agaagagctc atctcttgga accttctaac taggaccaac 540 aacaacttcc actatgtcag tctccgagtc acactcatct gggttctggg attgtgtgtg 600 cgctactgta ttctcctgcc tttgcgtatt acacttgcaa caattgggat cagctggcta 660 gtattaggag cgacacttgt tggacagctg ccaaacagca ggatgaaaag ttggttcagt 720 gaactggttc acctgatgtg ttgtcgtata tgtgccagag ctctctctag tgcaattcag 780 taccacaaca aagaaaacaa gcctaaaaaa ggtgggattt gtgttgccaa ccacacttct 840 cctatagaca tcattatctt ggctaatgat ggctgctatg ccatggttgg acaagttcat 900 gggggcctga tgggaattat ccagagagct atggcaagag cttgtcctca tgtgtggttt 960 gaacggtctg aaatgcgaga ccgccatctt gtgacagaaa ggcttagaga acatgtatct 1020 gataaatcaa aactgccaat tcttattttc cctgaaggaa cctgcatcaa taatacatcc 1080 gtaatgatgt tcaaaaaggg aagttttgaa attggaggaa ccatttaccc agttgcaata 1140 aagtatgacc cccagtttgg ggatgctttc tggaacagca gtaaaaatag catggtgagc 1200 tatcttttga gaatgatgac aagctgggcc ctcaagtgca atgtgtggta cctcccccca 1260 gtgaatagac aggatggtga agatgctgtt cagtttgcca acagagtgaa atctgcaatt 1320 gccaaacaag gaggacttgt tgaactcccg tgggacggag gcctgaaaag agggaaagtt 1380 aaagactcct ttaaagaaga gcagcagaaa aattacagca ggattattgc aggggaaaat 1440 aagtccctaa aaccaaccac ccactgatca ccttttttgg gtattcttgt gctgactcca 1500 acatatgatt tcgccagcat agctatcatt cctgcaaaaa gaataccgta catttgtatt 1560 atattaactt gctggtcttt tgttactgct tgaaccacca tcttagctgc tgcataatta 1620 gatgtcccat atttgaaagt taaaatattg ttttgctttg gtaagatcac tttctttttc 1680 aggcactctg tagtgtcttt tatattattc caaaaaatac aactattaac aggaaaactg 1740 gatactacct gaacatctag aacatgcagc atcttatggc ttaattaaga tgtgtgaaaa 1800 acaatctata taggataaat tgctatttcc tttttctaac tacttttttg cttaaaatga 1860 atgcaaaaga atccctttat gtttgtagaa ataagtgaaa ctgatctgca ttgttgtaac 1920 atggtgctca ctttaaatct gcatgtttgt gcaatgttag ataaataagg ccttaaggcg 1980 attgttgatt gtgaaacatc aagtcagcta cagtaggtta tgaagcaccg tttctgtatg 2040 ataacttgaa attgttgtgt tagtaatgga tggccagtgc cttgttagtt aatgtcaaat 2100 tggtaaaagt ttttttaata gtcttcccat aaatatacag aaatgctaat gctatatgca 2160 tgtatggtaa catgtcaatc aaagggtcag tattcacata aaaacacctt tactaaacag 2220 ataacaataa atctgacttg tgctgataaa aaaaaaaaaa aa 2262 // |
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