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EBI DbfetchID BC079798; SV 1; linear; mRNA; STD; VRT; 3523 BP. XX AC BC079798; XX DT 04-AUG-2004 (Rel. 80, Created) DT 27-MAY-2005 (Rel. 83, Last updated, Version 3) XX DE Xenopus laevis MGC86371 protein, mRNA (cDNA clone MGC:86371 IMAGE:7010922), DE complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-3523 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-3523 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-3523 RA Klein S., Gerhard D.S.; RT ; RL Submitted (02-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998K1614718Q. DR ImaGenes; IRAKp961J02169Q. DR ImaGenes; IRBHp990F1049D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, CC Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, CC Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, CC Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, CC Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie CC Schein, Asim Siddiqui, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 169 Row: j Column: 2 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Similarity but not CC identity to protein. XX FH Key Location/Qualifiers FH FT source 1..3523 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Kid1" FT /clone="MGC:86371 IMAGE:7010922" FT /tissue_type="Kidney, adult Xenopus" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT gene 1..3523 FT /gene="MGC86371" FT CDS 15..2000 FT /codon_start=1 FT /gene="MGC86371" FT /product="MGC86371 protein" FT /db_xref="GOA:Q6AX23" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/Swiss-Prot:Q6AX23" FT /protein_id="AAH79798.1" FT /translation="MAAFVGLPLRSVPMLLLLLLLVVAGTARGETLYGPEDSVTILNKE FT SVARAVFNSSSAWLLEFYSSWCGHCINYAPTWKALARDVRDWEPAIKIGVLDCAEEDNY FT GACKDFGVTLYPTFRFFKAFTKEFTQGENYKAVGDREIQTVRQVIIDFLQTSPAESKPQ FT AWPSLEPISSSEISSLLTPKQSHYTAIIFESEESYEGREVILDLIQYSNIVVRRALPSD FT KPILEKLGIGSVPSCYLIQPNGLHGLINDVKSIRSQLSLHLKALSNVRKLLPSETAHSG FT LSKGVQQEDTTMNQFDRSKLYMTDLESGLHYILRAELANHHTLEGEKLKTFKDFVTILY FT KLFPGRPHVMKLLETLQEWLVSMPLDTIPYDAILDLVNNKMRISGIFLTNHTQWVGCRG FT SKSNLRGYPCSLWKLFHSLTVQAAVKPDALANTAFEAEPRAVLQTMRRYIREFFGCREC FT AKHFEAMAKETVDSVKTPDQAILWLWRKHNVVNNRLSGAPSEDPKFPKVQWPTSDLCSA FT CHSQTGGVHSWNEDEVLAFLKRYYGNQEISLEFADPRKDLSEAATDNGNKEPHFTKKPQ FT ERDYVKKQNPQFLDKLVQKKPEKSLDSEAAESSQSVSFLGIGFSNIDMSLCVILYVTSS FT LFLMIMFFFFRFRSKRWKVRYNRPFV" XX SQ Sequence 3523 BP; 917 A; 801 C; 828 G; 977 T; 0 other; ctggaagaga cgcaatggcc gcgttcgtcg ggctgccgct ccgctcggta ccgatgttgt 60 tgctgctgct gctgttggtt gtggccggga ccgcgcgggg ggagacgctg tacgggccgg 120 aggattctgt caccatcctg aataaggagt cggtggcgcg ggctgtgttt aactcttcct 180 ctgcctggct cctcgagttc tactcgtcct ggtgcggaca ctgtatcaac tacgccccca 240 cctggaaggc cctggcccgg gatgtgcgcg actgggaacc agccataaag attggggtgt 300 tggactgcgc cgaggaggac aattatgggg cctgcaaaga ctttggtgtc accttatatc 360 ccacctttcg gttctttaag gccttcacca aggagttcac acaaggagag aattataaag 420 ccgtaggtga ccgggagatc cagaccgtcc ggcaagtgat tatcgatttc cttcaaacgt 480 ccccagcgga aagtaagcca caggcctggc cctcgttgga gcccattagt tcaagtgaaa 540 tttcgtctct tcttacccca aaacaatccc actacaccgc catcatcttt gaaagcgaag 600 agtcttacga agggcgcgag gtgatcttag atctgatcca gtacagtaac atagtggtga 660 ggagagcgct gccttctgat aagcccatcc tggagaaact gggtatcggc tccgtccctt 720 cgtgttattt gatccaacca aatggcttgc atggattaat taacgatgta aaatccatcc 780 ggtcccagct ttccttgcac ttgaaggctc tatccaatgt aaggaagctg ctgccatccg 840 aaaccgcaca ttcaggactg agcaaaggtg tgcagcagga agacacgacc atgaaccagt 900 ttgatagatc caaactgtat atgacagacc tggagtcagg cttacattac attctccggg 960 cagaattggc caatcaccac acactggagg gtgagaaact caagacgttt aaggactttg 1020 ttaccatcct ttacaagcta tttcccggga ggccacatgt gatgaagctt cttgagacac 1080 tgcaggaatg gctggttagc atgccgttgg acacgatccc ttatgacgct atcctggatc 1140 tggtcaacaa taaaatgcgg atctctggga tattccttac taatcacacc cagtgggttg 1200 ggtgccgagg cagtaagtcc aaccttaggg gctacccatg ctccctgtgg aagctcttcc 1260 actctctgac tgttcaggct gctgtcaaac cggatgcctt ggcaaacact gcatttgaag 1320 ctgaaccccg ggctgtcctg cagaccatga ggcgatacat acgggagttt ttcggttgtc 1380 gagaatgtgc caagcatttt gaggcaatgg caaaggaaac tgtggacagt gttaaaacgc 1440 cagaccaggc gatcctttgg ctgtggagga agcacaatgt ggtcaacaac agactttctg 1500 gtgcccctag tgaagacccc aagtttccaa aggtccagtg gccgacctct gacctgtgct 1560 ctgcttgcca cagccagact ggtggggtgc acagctggaa tgaagatgag gtgcttgctt 1620 ttctaaaacg ctactatggc aaccaggaga tttccttgga atttgccgac ccgagaaagg 1680 acctcagtga agccgccact gacaatggca ataaagagcc gcatttcacc aagaaacccc 1740 aagaaagaga ctatgtcaag aagcaaaacc cccaatttct ggataaactt gttcagaaaa 1800 agccagagaa aagtctagat tctgaggctg cagaaagcag tcagtctgtc agtttcctag 1860 ggatcggctt ctccaatata gacatgagcc tgtgcgtcat cttatatgtc acctcttcct 1920 tatttttaat gatcatgttc tttttcttcc ggttccgctc gaagaggtgg aaagttcgat 1980 acaaccgacc ttttgtgtaa atctattgat tttttttgtt ttaaatggga aaacgtgaag 2040 gttttcagac tgccgagttc tacttcatgt ggctttatta tttgtgaaga tcagggattt 2100 ttgaagacat tttagatttt aagttatttc cttttggagt tcattatttt gttttttttt 2160 tgtttttctt ttttagaact gtctaaaaga ttttggtggt gccatacttg aactatttat 2220 caagatttgt ctttatcctt caagggttat tctagggaca gcagcagcat ggacagtagc 2280 tttcaacttg ctgaaatgga tctggctatt gtctgccacc agctacgaat ttcacgtgtg 2340 ggacgggtca cctacaacca ccccttaaaa agaggaagga gacctgggcc ccactgcgaa 2400 ctctgggtct gcttcaccac tgtttaaggg tgacatttta ggtatagtgt aacctgtcca 2460 actcataaac tgaccatata tgacaatatc cacaaggttg ccaaacaaga agaattttgc 2520 ctcatttccc atctatgggc ttggccatat tggtataatt gactggttaa tccagttatt 2580 ggcctacgtg ccaaacgtac tgcaggacta cgcagatcca ttgggaaagg accacataga 2640 cacattggag cagcttaatt tgctagcctg cctaatagat atctggcatg ttcccatgaa 2700 ggctacacac acagtccaat aataagttgt tgatgttacc catagggttg gtgtaaactg 2760 tcttatctat gttcccaact cataaactgg gcacatatgc caatatcctc aaggttgcca 2820 aaccagaaga attttgcctc atttcctatc tatgggtttt gccatattat tggtataatt 2880 gactgattga tccagttata ggcctatgtg ccaaaggacc acatagacac atctcagtag 2940 tcctccacgg tcagaattgt ctagcctgcc taatatatat ctggcatgtt cctttgaagg 3000 ccccatacac agtccaatta ttattgacgt taccctgagg tgccatgttg gaagcccctg 3060 tatagcttta gtcctggagg gggttattat gctaaatggt tatttgtgca tagtcctgct 3120 atttaataca tcttaatgat ctgtgtggtt gttattctaa caaataattt accttaagtt 3180 catgggtatc catttcaaac cttatttatt ttatgccaat tctgtgtttt tcacagtcca 3240 gtcgtataat tactacagat ttggggagat ttcccagcca ataggagcga gtctggatca 3300 gagataccca catgacgctt ggccagatca ctgagaagat atgtaattcc ttgcagttcc 3360 aagccagaca ctgatgtcat gggaaaatca gattggaaca gtttttcctt ttggctgatg 3420 tttgattggc taaactgatc cgaggggggg ggtgggaagg accacttgga cgtgagttca 3480 aaaatggaat aaattacact ataaatgaaa aaaaaaaaaa aaa 3523 // |
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