EBI Dbfetch

ID   BC079462; SV 1; linear; mRNA; STD; ROD; 1782 BP.
XX
AC   BC079462;
XX
DT   04-AUG-2004 (Rel. 80, Created)
DT   16-JUL-2006 (Rel. 88, Last updated, Version 5)
XX
DE   Rattus norvegicus paraoxonase 2, mRNA (cDNA clone MGC:95017 IMAGE:7122087),
DE   complete cds.
XX
KW   MGC.
XX
OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
XX
RN   [1]
RP   1-1782
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-1782
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (02-AUG-2004) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
XX
DR   ASTD; TRAN00000014668.
DR   Ensembl-Gn; ENSRNOG00000009112; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000036460; Rattus_norvegicus.
DR   ImaGenes; IMAGp998O1315007Q.
DR   ImaGenes; IRAKp961D02183Q.
DR   ImaGenes; IRBPp993D0911D.
XX
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Howard Jacobs
CC   cDNA Library Preparation: Express Genomics
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Sequencing Group at the Stanford Human Genome
CC   Center, Stanford University School of Medicine, Stanford, CA  94305
CC   Web site:       http://www-shgc.stanford.edu
CC   Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
CC   Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
CC   R. M.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 183 Row: d Column: 2
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 61556887.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1782
FT                   /organism="Rattus norvegicus"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_MGC_232"
FT                   /clone="MGC:95017 IMAGE:7122087"
FT                   /tissue_type="Lung, rat (Brown Norway)"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:10116"
FT   gene            1..1782
FT                   /gene="Pon2"
FT   CDS             53..1117
FT                   /codon_start=1
FT                   /gene="Pon2"
FT                   /product="paraoxonase 2"
FT                   /db_xref="GOA:Q6AXM8"
FT                   /db_xref="InterPro:IPR008364"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6AXM8"
FT                   /protein_id="AAH79462.1"
FT                   /translation="MGRLVALSLLGIGLALLGERFLALRSRLKASREVESVDLPNCRLI
FT                   KGIETGAEDIDILPNGLAFFSVGLKFPGLHSFAPDKPGGILMMDLKEEKPRALELRVSW
FT                   GFDLASFNPHGISTFIDDDDTVYLFVVNHPEFKNTVEIFKFQEEENSLLHLKTIKHELL
FT                   PSVNDVIAVGPSHFYATNDHYFSDPFLKYLETYLNLRWANVVYYSPEEVKLVAEGFDSA
FT                   NGINISPDKKYVYVADILAHEIHVLEKQPNMNLTQLKVLQLGTLVDNLSIDPSSGDIWV
FT                   GCHPNGQKLFVYDPNHPPSSEVLRIQNILSEKPSVTTVYINNGSVLQGSSVATIYDRKL
FT                   LVGTLYQRALYCEL"
XX
SQ   Sequence 1782 BP; 507 A; 383 C; 396 G; 496 T; 0 other;
     gtccggtgca gcccggtcag gcccaaacca gacggcgggc cggtcccgcg ccatgggccg        60
     gctggtggct ctgagtttgc taggcatcgg gctggcgctt ctgggcgagc ggttcttggc       120
     gctcagaagt cgacttaaag cctccagaga agtagaatct gtagaccttc caaactgccg       180
     cctcattaaa ggaattgaaa ctggcgctga ggacattgac attcttccca atggtctggc       240
     attctttagc gtgggcctca agtttccagg acttcacagc tttgcaccag acaaacctgg       300
     agggatactg atgatggatc tcaaagagga gaaaccaaga gcactggagt taagagtcag       360
     ctggggcttt gatttggctt cattcaaccc acatggcatt agcactttca tagatgatga       420
     tgatacagtt tatctctttg ttgtgaacca cccagaattc aagaatacag tggaaatttt       480
     taaatttcaa gaagaagaaa attctctgct gcacctgaaa acaattaaac atgagctcct       540
     tccaagtgtg aatgatgtca tagctgttgg gccctcccac ttctacgcca ccaatgacca       600
     ctacttctcc gaccctttct tgaagtattt ggaaacatac ttgaacctac gttgggcaaa       660
     tgttgtttac tacagtccag aagaagttaa gctggtggca gaaggattcg actcagccaa       720
     cgggatcaac atttcacctg ataaaaagta tgtttacgtt gctgacatat tggctcatga       780
     aatccatgtt ttggaaaaac agcctaatat gaatttaact caactaaagg ttctgcagtt       840
     gggcacgctg gtggacaatt tatctattga tccttcttca ggcgacatct gggtcggctg       900
     tcaccctaac ggccagaagc tcttcgtgta cgacccgaac catcctccct cgtcagaggt       960
     tctccgaatt cagaacattc tatccgagaa gccatcggtg acgacagtgt acatcaacaa      1020
     cgggtctgtc ctccagggta gttctgtggc aaccatatat gacaggaaac ttcttgtagg      1080
     cactttatac cagagagctt tgtactgtga actctaattt gttggcatgt aagtgcaata      1140
     agttttaaca aaataacctt ttgattaatg actaattctg agggtattta accatcagta      1200
     ctgacctagt aagacaccac atacgtagtt ccttttattt caataattcc gattccccac      1260
     aattctgatg cacttttagc gttagaagaa aacgaacttt atttttggtt ttgtttgttt      1320
     gtttgtttgt gttatgccga tccagcgaga aagaagaaag ctgcttttct acgaagtgag      1380
     tgcattttgc acagaggggt ttcacctccg tgccaccaac ctctaggagt ccactgaaac      1440
     agggagtgtt ataaaaatgt cagtggcctc ggtccccatg ctgtgactac tgaatgtgtt      1500
     caagactact gacagatagc atttccatgt tttgtacctc cagctttgtt tactgtttta      1560
     caaattagaa ttgtattaaa ggctaaccaa aatccagggg gttgtttgtg tttgattccc      1620
     aagggagatc ctcagaagga ggccgggggc ggggggattc tgttggacaa gaataaatga      1680
     ccatgttaat ttctcataaa agctgtatgt aaagggactc tttattggaa aaataaaata      1740
     aaacaaccga cttctataaa aaaaaaaaaa aaaaaaaaaa aa                         1782
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