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EBI DbfetchID BC079446; SV 1; linear; mRNA; STD; ROD; 1581 BP. XX AC BC079446; XX DT 18-AUG-2004 (Rel. 80, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 7) XX DE Rattus norvegicus HypB, AroK, ADK and rho factor domain containing protein DE RGD1303144, mRNA (cDNA clone MGC:94995 IMAGE:7115585), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1581 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1581 RG NIH MGC Project RA ; RT ; RL Submitted (02-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000016220. DR Ensembl-Gn; ENSRNOG00000012761; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000017029; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000067789; Rattus_norvegicus. DR ImaGenes; IMAGp998P1514990Q. DR ImaGenes; IRAKp961A01183Q. DR ImaGenes; IRBPp993D0411D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Howard Jacobs CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 183 Row: a Column: 1 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 51948505. XX FH Key Location/Qualifiers FH FT source 1..1581 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_237" FT /clone="MGC:94995 IMAGE:7115585" FT /tissue_type="Testis, rat (Brown Norway)" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..1581 FT /gene="RGD1303144" FT /note="synonym: MGC94995" FT CDS 17..1456 FT /codon_start=1 FT /gene="RGD1303144" FT /product="HypB, AroK, ADK and rho factor domain containing FT protein RGD1303144" FT /db_xref="GOA:Q68FP8" FT /db_xref="HSSP:1ZAK" FT /db_xref="InterPro:IPR000850" FT /db_xref="InterPro:IPR007862" FT /db_xref="UniProtKB/Swiss-Prot:Q68FP8" FT /protein_id="AAH79446.1" FT /translation="MDATSAPHRIPPEMPQYGEDYHIFEMMQSMLEQLLIHQPEDPISF FT MISHLRRNNDNVPRVVILGPPASGKTTIAMWLCKHLNSNLITKENLLEREFSLLSLEAK FT KHYQVYKRVPNSTLVSLVQERLNEDDCLRRGWILDGIPERREQALMIQTLGLAPKHVIV FT LSAPDSVLIERNVGKRIDPVTGEIYHTTFDWPPELEIQNRLIQPEGISEIDTAKKLLEY FT HRHIIRILPSYPKILKTISSDQPCVDVFYQALTYVQSGHRCNAPFTPKVLLCGPMGCGK FT KLQAALLSQKYGLVNISCGQLLKEAMAAESSLGDLIEPFFEKRMTVPDSIITRVLTERL FT KQQDCIQKGWVLHGFPRDLDQARLLNSMGYSPNRVFFLNVPLDSILERLTLRRTDPVTG FT ERFHLMYKPPPTIEVQARLLQNPKDSEEYIKLQTDLFYRNSGDLEQYYDRAIIVNGDQD FT PYTVFEYIESGIINPLPRKVT" XX SQ Sequence 1581 BP; 440 A; 441 C; 387 G; 313 T; 0 other; gctcgttgtc cgaaacatgg atgctacctc ggccccgcac cgcatccccc cagaaatgcc 60 tcagtacggg gaagactacc acatcttcga gatgatgcag agcatgctgg agcagctcct 120 gattcaccag ccagaggacc ccatcagctt catgatcagt caccttcgca ggaacaacga 180 taatgtgccg agagttgtga tattaggtcc gcctgcctca gggaaaacca ccatcgcgat 240 gtggctctgc aaacatctga acagcaacct catcaccaag gagaacttat tagagagaga 300 gttttccctc ctgtctctgg aagccaagaa acactaccag gtttacaaga gagtgcccaa 360 ttcgactctt gtcagcctgg tccaggagcg tctgaatgag gatgactgcc tcagaagggg 420 ctggatcctg gatggcatcc ccgagaggcg ggagcaggct ctgatgatcc agaccctggg 480 actggcaccc aagcacgtca tcgtgcttag cgctccagac tccgtcctga tcgagagaaa 540 tgtggggaaa cggattgatc ctgtcactgg agagatctat cacaccacct tcgactggcc 600 ccctgagctt gaaatacaga acaggctgat acagccagaa ggcatctcgg agatagacac 660 agcgaagaag ctgctggaat accacaggca catcatcagg attcttcctt cctaccctaa 720 aatcctgaaa actatcagct cagaccagcc atgtgtggat gtcttctacc aggctctgac 780 ctacgtccaa tctggccacc gatgtaatgc cccgttcacc cccaaggtgc tgctgtgtgg 840 gccaatgggc tgtgggaaga aactgcaggc tgcccttctg tcccagaaat atggcctcgt 900 gaacatcagc tgcgggcagc tgctgaagga agctatggca gccgaatcga gccttgggga 960 cctcatagaa ccattctttg aaaagaggat gacagttcca gacagtatca tcaccagagt 1020 tctgactgag cgtctgaagc aacaagattg catccagaaa gggtgggtgc tgcacggctt 1080 cccaagagac ctggaccagg cccggctgct gaactctatg ggctacagtc ccaacagggt 1140 gttcttcctg aatgtgccgt tggattccat cctggagcgg ctcacactga gaaggacaga 1200 ccctgtcaca ggagaaaggt tccatctcat gtacaagccc cctcccacca tagaggtcca 1260 ggctcgcctc ctgcagaacc ccaaggattc agaggagtac atcaagctcc aaacggactt 1320 gttctatagg aactctgggg acctggagca gtactacgat cgggccatca ttgtcaacgg 1380 tgaccaggac ccatacacag tttttgagta tatagagagt ggaatcatta atcctctgcc 1440 caggaaagtt acctgatatg tggggagcca ggaacaagcc ccaaagacac tcaaatcccc 1500 tgccctcaac cttcatcaga ccccacccag ccaataaaga tgctagtcac aaaaaaaaaa 1560 aaaaaaaaaa aaaaaaaaaa a 1581 // |
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