 |
|
EBI DbfetchID BC079366; SV 1; linear; mRNA; STD; ROD; 1995 BP. XX AC BC079366; XX DT 18-AUG-2004 (Rel. 80, Created) DT 12-JUN-2008 (Rel. 96, Last updated, Version 7) XX DE Rattus norvegicus betaine-homocysteine methyltransferase 2, mRNA (cDNA DE clone MGC:94849 IMAGE:7109516), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1995 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1995 RG NIH MGC Project RA ; RT ; RL Submitted (02-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ImaGenes; IMAGp998C1814975Q. DR ImaGenes; IRAKp961N07181Q. DR ImaGenes; IRBPp993B118D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Howard Jacobs CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 181 Row: n Column: 7 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 62079242. XX FH Key Location/Qualifiers FH FT source 1..1995 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_235" FT /clone="MGC:94849 IMAGE:7109516" FT /tissue_type="Kidney, rat (Brown Norway)" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..1995 FT /gene="Bhmt2" FT CDS 24..1115 FT /codon_start=1 FT /gene="Bhmt2" FT /product="betaine-homocysteine methyltransferase 2" FT /db_xref="GOA:Q68FT5" FT /db_xref="InterPro:IPR003726" FT /db_xref="UniProtKB/Swiss-Prot:Q68FT5" FT /protein_id="AAH79366.1" FT /translation="MAPAGGPRVKKVILERLDSGEVVVGDGGFLFTLEKRGFVKAGLWT FT PEAVVEYPSAVRQLHTEFLRAGADVLQTFTFSAAEDRMESKWEAVNAAACDLAQEVADG FT GAALVAGGICQTSLYKYHKDETRIKNIFRLQLGVFARKNVDFLIAEYFEHVEEAVWAVE FT VLREVGAPVAVTMCIGPEGDMHGVTPGECAVRLSRAGANIIGVNCRFGPWTSLQTMKLM FT KEGLRDAGLQAHLMVQCLGFHTPDCGKGGFVDLPEYPFGLEPRVATRWDIQKYAREAYN FT LGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGIWGSGLDMHTKPWIRARARR FT EYWETLLPASGRPFCPSLSKPDA" XX SQ Sequence 1995 BP; 521 A; 454 C; 535 G; 485 T; 0 other; cgcgcttgca cagtggcggc gacatggcac cagccggagg cccacgagtc aagaaggtta 60 tcttggagcg tctggacagc ggggaggttg tggttgggga cggcggcttt ctcttcactc 120 tggaaaagag aggctttgtg aaggcaggac tttggactcc agaagcagtg gtagagtatc 180 caagtgcagt tcgtcagctt cacacagaat tcttgagagc gggagccgat gtcttgcaga 240 cattcacctt ttcggctgct gaagacagaa tggaaagcaa gtgggaagct gtgaatgcag 300 ctgcctgtga cctggcccag gaggtggctg atggaggggc tgctttggtg gcagggggca 360 tctgccagac atcactgtac aagtaccaca aggatgaaac tagaattaaa aacattttcc 420 gactacagct aggtgttttt gccaggaaaa atgtggactt cttgattgca gagtattttg 480 agcatgtgga agaagccgtg tgggctgtgg aagtcttgag agaggtgggg gcacctgtgg 540 ctgtgaccat gtgcatcggc ccagaggggg acatgcacgg cgtgacaccg ggagagtgtg 600 cggtgagact gtctcgtgca ggggcgaaca tcattggggt aaactgccgg tttgggccct 660 ggaccagctt acagaccatg aagctcatga aggagggcct cagggatgcc ggcctacaag 720 ctcaccttat ggtccagtgc ttgggtttcc acacaccgga ctgtggcaag ggagggtttg 780 tggaccttcc tgaatatcct ttcggcctgg agccaagagt tgccaccaga tgggatattc 840 aaaaatacgc cagagaggcc tacaacctgg gggtcaggta cattggcggc tgctgcggat 900 ttgagcccta ccacatcagg gccattgcag aggagctcgc cccagaaagg ggatttttgc 960 caccagcttc agaaaaacat ggcatctggg gaagtggttt ggacatgcac accaaaccct 1020 ggatcagagc aagggctaga cgggaatact gggaaactct gttgccagct tcgggaagac 1080 ctttctgtcc ttccctatca aagccagatg cttgagaagc catgaaagag acctctgaag 1140 tgacagaaag gaggaaacag cctcaagccc catctggaat cttcctggct gctgtcctca 1200 gcccgttctt ctggctgttg agcatcgatg agctgtcgtc ccttccaatt gagtgacata 1260 tcactcctga gtatgcccac tagatgcggt ggagatgcag aggcatccgg accccacgcc 1320 ccaccccctc ccctcacaca cttactctct gcctagtaat gccacagagc ttccatcccc 1380 atccaaaggt catcaggcat ggctatcagt tggctctcag ggtggatttg acattctcag 1440 atgattagaa gttggcaaga agcaaccttg gtgaataact ctggtgtcta aactctgtac 1500 ttgagttaca gtctcagtag aggagacgcc aaagctgttg cgagtgacgg caggattatt 1560 gaacagtcat gatgcttggc tttcaaaggc gattatcgct ttaaggtctt agaattagta 1620 agtgcatctt tataaccagg catagctaga tcataaacta ctgatggcca aggaccatag 1680 aacgtgcttc ttaccttcct ctctagttag cattacgaca aacataatca ccaacgctca 1740 gggaaacact tgctgattca agtaaaatgc atgaaccttg gaagaccttt ctagaagtca 1800 gagatcaagt tcatcttgtt ctagcacttt ccacattcat gtttggtttg tatgctgcgc 1860 cctacttttg ttttttgcta caatgtaaca aattagtgag taaccattag tgaaattgcg 1920 aataattttc cttttctaaa ttttgatttc tttggaacat tgatttaaaa aaaaaaaaaa 1980 aaaaaaaaaa aaaaa 1995 // |
|