 |
|
EBI DbfetchID BC079235; SV 1; linear; mRNA; STD; ROD; 1349 BP. XX AC BC079235; XX DT 04-AUG-2004 (Rel. 80, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 7) XX DE Rattus norvegicus cytochrome b5 reductase 2, mRNA (cDNA clone MGC:94317 DE IMAGE:7132617), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1349 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1349 RG NIH MGC Project RA ; RT ; RL Submitted (02-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000025235. DR Ensembl-Gn; ENSRNOG00000019751; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000026744; Rattus_norvegicus. DR ImaGenes; IMAGp998F0715035Q. DR ImaGenes; IRAKp961B19185Q. DR ImaGenes; IRBPp993F0716D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Howard Jacobs CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 185 Row: b Column: 19 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 62079218. XX FH Key Location/Qualifiers FH FT source 1..1349 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_238" FT /clone="MGC:94317 IMAGE:7132617" FT /tissue_type="Testis, rat (Brown Norway)" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..1349 FT /gene="Cyb5r2" FT /note="synonym: RGD1308421" FT CDS 244..1074 FT /codon_start=1 FT /gene="Cyb5r2" FT /product="cytochrome b5 reductase 2" FT /db_xref="GOA:Q6AY12" FT /db_xref="HSSP:1NDH" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR001709" FT /db_xref="InterPro:IPR001834" FT /db_xref="InterPro:IPR008333" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/Swiss-Prot:Q6AY12" FT /protein_id="AAH79235.1" FT /translation="MSVKKKDLITLQDPEAKYPLPLIEKEQINHNTRRFRFGLPSPDHV FT LGLPVGNYVHLLAQINNELVIRAYTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQ FT YLENMKIGDTILFRGPTGRLFYNEPGTLLIKTDKTSEPEKKLVHHLGMIAGGTGITPML FT QLIRHITKDTSDGTRMSLLFANQTEEDILLRKELEEVATTHQNQFSLWYTLDRPPSGWE FT YSSGFITADMIKEHLPPPGEATLILVCGPPPLIQEAAHPSLEQLGYTKDMIFTY" XX SQ Sequence 1349 BP; 402 A; 331 C; 318 G; 298 T; 0 other; caggcagtgg cctggtcagg attcatgggc ggtttcccag ctgttcggac agtggatctc 60 tgagccaaag gactacgcag cagacttttc tcaaaacagt cacttgccta tgaaggtgct 120 agtgagtccc caagccactc acagctccac tgctccagcg gaatccgaag tgagtttggc 180 aagtctctag agaggaccag acctgtcgcc agggccatcg tgattctctt agccttaaag 240 aaaatgagcg tcaagaagaa agatcttatc actttacagg accctgaagc caagtacccg 300 ctgcccttga ttgagaaaga gcaaatcaac cacaacacca gaaggttccg atttggactg 360 ccctcaccag accatgtcct agggcttcct gtaggtaact atgtccatct cttggcacaa 420 attaacaatg aattggtgat cagggcttac acgcctgtct ccagtgacga tgatcaagga 480 tttgtggact taattataaa gatctacttc aaaaatgtgc accctaagta tcctgaagga 540 ggaaagatga ctcagtactt ggagaatatg aaaattgggg acaccattct ttttcggggg 600 ccaacggggc gcctgttcta taatgagcca gggacccttt taatcaaaac agacaaaacg 660 agtgagcctg aaaaaaagct ggttcatcac ctggggatga ttgctggagg cacaggcatt 720 acgcccatgc tacagctaat tcgccacatc accaaggaca ccagcgatgg gaccaggatg 780 tccctcctct ttgccaacca gacagaagag gatatcttgc tgagaaagga gctagaagaa 840 gtggccacaa cgcatcagaa ccagttcagc ctgtggtata ccctggacag gccccccagt 900 ggttgggagt acagctcagg cttcattact gcagacatga tcaaggagca cctccctcct 960 cctggggagg ccacactcat cctggtatgt ggcccaccac ctctgatcca ggaggcagct 1020 caccccagcc tggagcagct tggctacacc aaggacatga tttttaccta ctaacacctc 1080 ccacgatacc tagtgggtcc ctgtgtcaca gtgagtttga cttcatgctg ttcaactaag 1140 gtgtcactcc aggcaccatt aggcatggca ttcttttcat tgtgggccta agaagagaaa 1200 ggggctgaag agaaaaatga tttttgagct tctaggcttg gaggctggga aggaagccac 1260 tttctccatg gcttagtgga ataaactaga ctactctgca tttaaaaaaa aaaaaaaaaa 1320 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa 1349 // |
|