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EBI DbfetchID BC079222; SV 1; linear; mRNA; STD; ROD; 1582 BP. XX AC BC079222; XX DT 04-AUG-2004 (Rel. 80, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 6) XX DE Rattus norvegicus pyrroline-5-carboxylate reductase family, member 2, mRNA DE (cDNA clone MGC:94295 IMAGE:7132148), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1582 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1582 RG NIH MGC Project RA ; RT ; RL Submitted (02-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000012833. DR Ensembl-Gn; ENSRNOG00000003267; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000004379; Rattus_norvegicus. DR ImaGenes; IMAGp998B1815034Q. DR ImaGenes; IRAKp961O20184Q. DR ImaGenes; IRBPp993B0215D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Howard Jacobs CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 184 Row: o Column: 20 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 58865991. XX FH Key Location/Qualifiers FH FT source 1..1582 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_238" FT /clone="MGC:94295 IMAGE:7132148" FT /tissue_type="Testis, rat (Brown Norway)" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..1582 FT /gene="Pycr2" FT CDS 116..1078 FT /codon_start=1 FT /gene="Pycr2" FT /product="pyrroline-5-carboxylate reductase family, member FT 2" FT /db_xref="GOA:Q6AY23" FT /db_xref="InterPro:IPR000304" FT /db_xref="UniProtKB/Swiss-Prot:Q6AY23" FT /protein_id="AAH79222.1" FT /translation="MSVGFIGAGQLACALARGFTAAGVLSAHKIIASSPEMDLPTVSAL FT RKMGVNLTRSNKDTVRHSDVLFLAVKPHIIPFILDEIGADVQERHIVVSCAAGVTISSV FT EKKLMAFQPAPKVIRCMTNTPVVVREGATVYATGTHALVEDGKLLEQLMSSVGFCTEVE FT EDLIDAITGLSGSGPAYAFMALDALADGGVKMGVPRRLAVRLGAQALLGAAKMLLDSED FT HPGQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTRELQSMADQEKVSPAA FT LKKTLLDRVKLESPTVSTLAPPSSGKLLTRNPAQGSKRE" XX SQ Sequence 1582 BP; 355 A; 417 C; 488 G; 322 T; 0 other; gcatcccggt ttgaaagctg ttgcgagcaa ttcggatccg tctttttcca cgcgcagaca 60 ctgagccccg gattcccaga gtctccgggt cggcgctcgc cgggatcctg cagccatgag 120 cgtgggtttc atcggcgcgg gccagctggc ctgtgctctg gcgcggggct tcacggccgc 180 gggcgtcctg tcggctcaca agataatagc cagctccccg gaaatggacc tgcccacggt 240 gtctgcgctc aggaagatgg gtgtgaatct gacccgaagc aataaggaca cggtgcggca 300 cagtgacgtc ctgttcctgg ctgtgaagcc ccacatcatc cccttcatcc tggatgagat 360 cggggctgac gtgcaggaga ggcacatcgt ggtctcctgt gcggctggcg tcaccatcag 420 ttctgtggag aagaagctga tggctttcca gccagccccc aaagtgatcc gctgcatgac 480 caacacgcct gtggtggtcc gagagggggc cactgtgtac gccacaggca cccatgctct 540 ggtggaagat gggaagcttc tggagcagct gatgagcagt gtgggcttct gcacagaggt 600 ggaggaagac ctcattgatg ctatcacagg gctcagcggc agcgggcccg cctacgcgtt 660 tatggccctg gatgcgctgg cagacggcgg ggtgaagatg ggcgtgccgc ggcgcctggc 720 agtccgactg ggagctcagg cgttgctggg agcagctaag atgctgctgg attcagagga 780 ccacccgggc cagctcaagg acaacgtctg ctcccctggg ggggccacca tccatgccct 840 gcacttcctg gagagtgggg gcttccgctc tctgctcatc aatgcagttg aggcctcctg 900 tattcgaaca agagagctgc agtccatggc tgaccaagaa aaggtgtccc ctgccgccct 960 taagaagacc ctcctggaca gagtgaagct ggagtcaccc acggtgtcca cgctggcccc 1020 acccagctca gggaaactcc ttacaagaaa ccctgcccag ggaagcaaga gggagtgagg 1080 aggagtctgt ggggtgtccc tgtcccctgt agtacaggga gggcaggctc aggtctgggg 1140 gtgaaagctg cttactctgt tcacctggtg ccaccaagtc cttctcttgt cctgtggcag 1200 aaggcactct gaagaggcag ctgatgccag aagccagaga gcccagcgtg cctctccaag 1260 agaggtggag gccctggagt ctgcatcccc ctcagcagaa gtctgtggag aactttagtt 1320 agatccaagg gtggttcagt ttgacctcca ggtgaggtga gtggaaacag gaatcctctg 1380 aattaaaaac gtgcaaaaga agcatgtggc tgggtgttgc aggtggatgt gtggggaatc 1440 ccaagacctt ttcgcttaac tcttctgtac aggtgtcacc tagaaggtga tgttctgggc 1500 tagttttagc tgctttaata aagagcttat ttatttttga aaaaaaaaaa aaaaaaaaaa 1560 aaaaaaaaaa aaaaaaaaaa aa 1582 // |
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