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EBI DbfetchID BC079111; SV 1; linear; mRNA; STD; ROD; 1420 BP. XX AC BC079111; XX DT 18-AUG-2004 (Rel. 80, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 7) XX DE Rattus norvegicus mannose phosphate isomerase (mapped), mRNA (cDNA clone DE MGC:94106 IMAGE:7125738), complete cds. XX KW MGC. XX OS Rattus norvegicus (Norway rat) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Rattus. XX RN [1] RP 1-1420 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1420 RG NIH MGC Project RA ; RT ; RL Submitted (02-AUG-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000014804. DR Ensembl-Gn; ENSRNOG00000018898; Rattus_norvegicus. DR Ensembl-Tr; ENSRNOT00000025783; Rattus_norvegicus. DR ImaGenes; IMAGp998G1615017Q. DR ImaGenes; IRAKp961M11183Q. DR ImaGenes; IRBPp993D0613D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Howard Jacobs CC cDNA Library Preparation: Express Genomics CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 183 Row: m Column: 11 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 51854220. XX FH Key Location/Qualifiers FH FT source 1..1420 FT /organism="Rattus norvegicus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_232" FT /clone="MGC:94106 IMAGE:7125738" FT /tissue_type="Lung, rat (Brown Norway)" FT /note="Vector: pExpress1" FT /db_xref="taxon:10116" FT gene 1..1420 FT /gene="Mpi_mapped" FT /note="synonym: Mpi" FT CDS 11..1282 FT /codon_start=1 FT /gene="Mpi_mapped" FT /product="mannose phosphate isomerase (mapped)" FT /db_xref="GOA:Q68FX1" FT /db_xref="InterPro:IPR014710" FT /db_xref="UniProtKB/Swiss-Prot:Q68FX1" FT /protein_id="AAH79111.1" FT /translation="MANPRVFPLSCVVQQYAWGKVGSKSEVACLLACSDPLTQISEDKP FT YAELWMGAHPRGDAKILDNRISQKTLGQWIAENQNSLGQKVKDTFNGKLPFLFKVLSVE FT TALSIQAHPNKELAEKLHLQAPEHYPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLKK FT VPEFQSLIGEDATAQLKKSMNEGSGAMASALKNCFSHLMKSEKKVVVEQLNLLVKRISQ FT QISNGNSMDDICGELLLQLHQQYPGDIGCFAIYLLNLITLKPGEAMFLEANVPHAYLKG FT DCVECMACSDNTVRAGLTPKFIDVSTLCEMLDYTPSPSKDRLFAPTLSQDDPYLSIYDP FT PVPDFTVMKIEVPGSVTEYKVLTLDSASILLLVQGTVTAIIPSVQGEIPLSRGGVLFIG FT ANETVLLKLTVPKNLLIFRACCLL" XX SQ Sequence 1420 BP; 369 A; 378 C; 354 G; 319 T; 0 other; ggcaactagg atggcgaatc cgcgagtgtt cccactttcc tgtgtggtgc agcagtatgc 60 ctgggggaag gtgggctcca aaagtgaagt ggcatgccta ctggcttgca gtgacccact 120 gacccagatc tcagaggaca agccttatgc ggagctgtgg atgggggcac acccccgggg 180 agatgccaag atccttgaca accgtatttc ccaaaagacc ttaggccagt ggattgctga 240 gaaccagaac agcttaggcc aaaaggtcaa agacaccttt aacggaaagc tgcccttcct 300 cttcaaagtg ctctcagtgg aaacggccct gtctatccag gcacacccta acaaggagct 360 ggcagagaag ctgcaccttc aggctccaga gcactacccc gatgccaacc acaagccaga 420 aatggccatt gcccttacac ccttccaagg cttgtgtggt ttccggccag tggaggagat 480 tgtgaccttt ctgaagaagg tgcctgagtt ccagtcactg attggagagg atgccacagc 540 acagctgaag aagagcatga atgagggttc tggggccatg gcctctgctc tgaagaactg 600 cttttcccac ctgatgaaga gtgagaagaa ggtggtggtg gagcagctta acctgttggt 660 gaaacggatc tcccagcaaa tatctaacgg aaacagcatg gatgacattt gtggggagct 720 cttgctacag ctgcaccagc agtacccggg tgatatcgga tgtttcgcca tctacctcct 780 gaacctgatc accttgaagc ctggggaagc catgtttctg gaggccaacg tgccccatgc 840 ctacctgaag ggagactgcg tggaatgcat ggcatgttca gacaataccg tgcgtgctgg 900 cctgacaccc aaattcattg atgtgtcaac cctgtgtgaa atgctcgact acacacctag 960 ccccagcaaa gacagactgt ttgcaccaac actgagtcaa gatgacccct acctctctat 1020 ctacgatccc cctgtgccag acttcacagt tatgaagata gaggtccctg gctccgtcac 1080 tgaatacaaa gtcttgacac tagactctgc cagcatcctt ctgttggtcc aagggacagt 1140 gacagctatc ataccttcag tccaaggaga aatccctctg tcccgtggtg gagtgctctt 1200 cattggggcc aatgagactg tcttactgaa gcttaccgta ccaaagaatc tgctgatatt 1260 ccgggcctgc tgtctgctgt agagaccagt tcttagtctc tctgcctagc actatattct 1320 ggccagctcc acatcctgga gatccagccc aatccctgtc cctattgtgc aatctttgaa 1380 tacatactgg attagaaaaa aaaaaaaaaa aaaaaaaaaa 1420 // |
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