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EBI DbfetchID BC076788; SV 1; linear; mRNA; STD; VRT; 3166 BP. XX AC BC076788; XX DT 08-JUL-2004 (Rel. 80, Created) DT 27-MAY-2005 (Rel. 83, Last updated, Version 3) XX DE Xenopus laevis MGC83705 protein, mRNA (cDNA clone MGC:83705 IMAGE:6638532), DE complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-3166 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-3166 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-3166 RA Klein S., Gerhard D.S.; RT ; RL Submitted (06-JUL-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998K1214217Q. DR ImaGenes; IRAKp961B19158Q. DR ImaGenes; IRBHp990G0255D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Martha Rebbert, Steven L. Klein, Ph.D. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, CC Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, CC Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, CC Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, CC Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie CC Schein, Asim Siddiqui, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 158 Row: b Column: 19 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..3166 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_OO1" FT /clone="MGC:83705 IMAGE:6638532" FT /tissue_type="Oocytes" FT /note="Vector: pCMV-SPORT6.1" FT /db_xref="taxon:8355" FT gene 1..3166 FT /gene="MGC83705" FT CDS 99..1358 FT /codon_start=1 FT /gene="MGC83705" FT /product="MGC83705 protein" FT /db_xref="GOA:Q6DFF0" FT /db_xref="InterPro:IPR007754" FT /db_xref="UniProtKB/TrEMBL:Q6DFF0" FT /protein_id="AAH76788.1" FT /translation="MRLTLHKKKIAALVLVLFACAGLLHISTRRDEDQFLPPGPSEKSN FT ISDFQVPIGPPLQMRLTAYRNNLHQPVLNADKFPGHPELVVVVQMRGGPGSGARLRLLA FT ESLRPAGPRANSRLLLVLSMEKPCPEVVDAMLAIDFCRVLPIYFPYSLSFYPEEFPGAD FT PKDCPRDLSKESALQQRCNNAEFPDSHGHYREAPFALDKHHWWWKLHFTWERLREVNGY FT GGYIVFLEEGSYLLPDWQHMLRLMQKQCKEEGCQLLSLGGTASPDPSPDPEHMEVSGFV FT APKHRSAVGIPRELYYQLMGCLAEFCTYDDYNWDWSLQHLSASCLSHPLKVLSARLPRV FT LNLPSSPEDGECGRTGPCPSTDTASQNLRELVRQLSGRLFPRTAMVASRQQEIRNPPQI FT KNGGWGDIRDHGLCQSYARL" XX SQ Sequence 3166 BP; 830 A; 743 C; 752 G; 841 T; 0 other; cggacgcgtg ggtgggagta aaaggaacca taggcaccga gaggggagcc gggaatccac 60 cctggggcag ctgaggaccg gtaatttgtg acctgaccat gaggctgacg ctgcacaaga 120 agaagattgc tgccttggtg ctggttctgt ttgcgtgcgc tggtttgctc catatctcca 180 cccgccggga tgaagatcaa ttcctacccc cgggccccag tgagaagagt aacatctctg 240 acttccaggt gcccattggc cccccgctgc aaatgagact gactgcttac cgcaacaacc 300 tgcaccagcc agttctaaac gctgacaaat ttcctggtca ccctgagctg gtggtagtgg 360 tccaaatgcg aggtgggcct gggagtggtg ctcgtttgcg cctcctggct gaatctctgc 420 ggccagctgg gcctcgggcc aatagccgtc tgttgctggt gctgagtatg gagaagccgt 480 gccctgaggt tgtagatgcc atgctggcca tagacttttg ccgggtgctg cccatctact 540 ttccctacag cctgagcttc tacccagagg aatttcccgg agcagacccc aaagactgcc 600 ccagggattt atccaaggaa tctgcccttc agcagcgatg caacaacgcc gagttcccgg 660 atagccacgg gcactacaga gaagcgccat ttgctctgga caagcatcac tggtggtgga 720 agctccattt cacgtgggag aggctgcggg aggtgaatgg ctatgggggg tatatagtat 780 ttctggagga gggcagctat ctgctcccag actggcaaca catgctgcgc ctcatgcaga 840 aacagtgcaa ggaggaagga tgccagttgc tcagccttgg aggcactgcc agtcccgatc 900 cttcgcctga ccccgaacac atggaagtga gtggctttgt tgcaccaaag caccgttctg 960 cagtgggcat accccgggaa ctgtactacc agctgatggg gtgcctggcg gaattctgca 1020 cttacgatga ttataactgg gactggagcc tgcagcacct ctctgcctcc tgcctttccc 1080 acccactcaa agtgctcagc gcccgcctgc ctcgggtact caaccttccc tcctccccag 1140 aagacggtga atgtgggcgc actggaccat gtcctagtac agacaccgct tcccaaaatc 1200 tcagggagtt ggtcaggcag ctgagtggcc ggctcttccc aagaactgca atggtcgcca 1260 gtcggcaaca agagatccgc aatcccccgc aaatcaaaaa tggtggctgg ggggacatca 1320 gagaccatgg cctgtgccaa tcttatgcca ggctgtgatg taggcaatat gtttgcagtc 1380 tctgttctta ccaaagttcg gaataatctc aggaatttaa ttgcacaaga gacccctaat 1440 tgctgctttt aaaatttggc tgttgcgtag ctctgccttc tggtcgcatt tatcgccttt 1500 gtgccctcac cctggtgcct tacctatgga cgtagccttt cagatgattc ccaggagcat 1560 ttttaaacac tttaaagaca gaaattgatt ttatttcatg aaattgtttt tttgttttta 1620 gagtaattat attatttcct tccagatgcc tcactgtgcc agggctgtag ggcatttgat 1680 atatcaggac caaagtttat aggagccaaa actgacaggg agctttcctc tgccttatac 1740 cctggcactg agtcactgac atgcctatgt gccccccaaa ttctttttag aggggttaca 1800 aatggttgct ctgtatttct cctattgctg ccccactccc ccttccccca ggctttgtgg 1860 ggtttgtccc tatctttcca tgttggtgct gtgtgtcatg ttgcactaat gtgctgctga 1920 tattttatct atttaatcta gttacctctg attacacagt attaagggaa gttactcgtt 1980 tatggagggt tgtactggga gcgatatcac ttattggtgc tgcgtcagca gattgtgctc 2040 gtgctcagat gacacttgct tcatatcctt ggttcaaggg tcacaaggct ggtttatgtg 2100 tgtgtgtacg gccaggatac agtgtccctt cagctctgtt gggaaacctc ttctttcagt 2160 taattacagg gatattcatg gtgctctgga cggcatgtag tcaccttctc ttgcagaaag 2220 ctgacaattg ccacggtgcc tactctctgt gctctaatca aaggggaagt tggccgctac 2280 tatttttatt tacttcactt ttgagctgag cctgaggccc tgttaagggt tacaaaacaa 2340 aaagaaccgg tgacaggaaa aagtgtatgc actaccacaa tcaaaaagat ttcaatagat 2400 tatgctaacc accaaagatt gtttatgtgg gagggatata ctcacagttc accccagtct 2460 acaggtgcat atccaagaaa gtgcaacaat agttgtgagt ccctccaaaa acagtttaaa 2520 tgatcaaaaa tacaaaaata tttattagta tatagtaaaa aaaaaatggc ctaacgcgtt 2580 ttgtgcctat aggggcactt atagggttca gttcagtgta aaactaaaaa ctgggtaaat 2640 aggctctgca aataaaaaaa tgtttgtaat gtagttgtaa tgtaatctat aaagactaga 2700 gtgatgtcaa acagaacact acttcctgct tttcagctct ctctctgagt tagttagcaa 2760 ctttaagggg gcccacaagg gacataactg ttcagtgagt ttgcaattga tcctcagcat 2820 gcagctcaga ttcaaaagca acagttatga cccatgtggc cccgccctca agtcactgat 2880 tggttactga ctggtaacca atcagtggaa agcaagatag ctgaaaacag gaagtagtgt 2940 tctggctatt atattacgca tccagtcact ccagccttta tttatttatt tatatatata 3000 tatatatata tatataatat atattgtaca gcatttagcc ctaagtgaaa aaacagcatt 3060 caacggacat tgattacagg taatgctaaa atgcacataa aatataaaac aagttaggga 3120 aaagagaaaa aaaaaagaaa gataaaaata aaaaaaaaaa aaaaaa 3166 // |
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