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EBI DbfetchID BC076532; SV 1; linear; mRNA; STD; VRT; 2340 BP. XX AC BC076532; XX DT 08-JUL-2004 (Rel. 80, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 5) XX DE Danio rerio adenosine deaminase, mRNA (cDNA clone MGC:92028 IMAGE:7044437), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2340 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2340 RG NIH MGC Project RA ; RT ; RL Submitted (06-JUL-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000003113; Danio_rerio. DR Ensembl-Gn; ENSDARG00000006314; Danio_rerio. DR Ensembl-Gn; ENSDARG00000009386; Danio_rerio. DR Ensembl-Gn; ENSDARG00000034243; Danio_rerio. DR Ensembl-Gn; ENSDARG00000039340; Danio_rerio. DR Ensembl-Gn; ENSDARG00000056877; Danio_rerio. DR Ensembl-Gn; ENSDARG00000074761; Danio_rerio. DR Ensembl-Tr; ENSDART00000012574; Danio_rerio. DR Ensembl-Tr; ENSDART00000019519; Danio_rerio. DR Ensembl-Tr; ENSDART00000044314; Danio_rerio. DR Ensembl-Tr; ENSDART00000047843; Danio_rerio. DR Ensembl-Tr; ENSDART00000075533; Danio_rerio. DR Ensembl-Tr; ENSDART00000079454; Danio_rerio. DR Ensembl-Tr; ENSDART00000115036; Danio_rerio. DR Ensembl-Tr; ENSDART00000115205; Danio_rerio. DR ImaGenes; IMAGp998L0314805Q. DR ImaGenes; IRAKp961O20178Q. DR ImaGenes; IRBOp991C0743D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Len Zon, Harvard CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 178 Row: o Column: 20 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 49904345. XX FH Key Location/Qualifiers FH FT source 1..2340 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_10" FT /clone="MGC:92028 IMAGE:7044437" FT /tissue_type="Whole, adult zebrafish" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene 1..2340 FT /gene="ada" FT /note="synonym: zgc:92028" FT CDS 101..1189 FT /codon_start=1 FT /gene="ada" FT /product="adenosine deaminase" FT /db_xref="GOA:Q6DG22" FT /db_xref="InterPro:IPR001365" FT /db_xref="InterPro:IPR006330" FT /db_xref="InterPro:IPR006650" FT /db_xref="UniProtKB/Swiss-Prot:Q6DG22" FT /db_xref="ZFIN:ZDB-GENE-040718-393" FT /protein_id="AAH76532.1" FT /translation="MAEMNGKPAFDKPKVELHVHLDGAIRLKTVLDVAKRRGISLPVSM FT EEELKELCTVNEPATLTEFLGKFSHFMHVIAGDREAIKRIAYEFVETKAKEGVIYVEAR FT YSPHFLANKGVEPLPWDQKPGDITPDDVVDLVNQGFKEGEQAFKTKARSILCCMRHMPN FT WSMEVVELCKKFHKDGVVAIDLAGDESMNCESYPGHKKAFEEAVRSNVHRTVHAGEVGP FT ASVVREAVEVLKAERIGHGYHTLEDQNLYKQLLHQNMHFEMCPVSSRLTGACEPDFTKH FT PLITFKKDKANYSLNTDDPTIFNSTLNSDYEVVQKYMDFTEEEFKRLNINAAKSCFLPE FT KEKEKLLNQLYEAYGMRKSTSF" XX SQ Sequence 2340 BP; 777 A; 452 C; 488 G; 623 T; 0 other; cgcgcatggg gaagctgaac ttcgccgctt gagctgacag gttccggaga gcgcgtgttc 60 aacttgtatc acgacaaatt caagctttga aatcaacaca atggctgaaa tgaatggaaa 120 accagcattt gataaaccta aggttgagct acacgtgcat ctcgatgggg ccattagatt 180 aaagaccgtt ttagatgtag ccaagcggcg aggaatcagt ctacctgtga gcatggagga 240 agaactgaaa gagctgtgca cagtgaatga gccggccaca ctcacagaat tccttggcaa 300 gttcagtcac ttcatgcatg tcattgcagg ggacagagaa gccatcaaga gaatagcgta 360 tgagtttgta gagacaaagg ccaaagaggg agtgatctac gttgaagcca gatacagtcc 420 tcattttctg gccaacaagg gtgtggaacc tctaccttgg gaccaaaagc caggagacat 480 cactcctgat gatgtggtgg atctggtgaa ccagggattt aaagagggag aacaggcctt 540 caagaccaaa gccaggtcca ttctgtgctg catgcgtcac atgccaaatt ggtctatgga 600 ggtggtggag ctgtgtaaga agtttcataa agatggggtt gtggccatag acttagcggg 660 agatgaatcc atgaactgcg agtcataccc aggacacaag aaagcatttg aggaagccgt 720 cagaagtaat gtgcacagaa cagttcatgc aggagaagta ggtcctgcca gcgttgtgag 780 agaggctgtt gaagttctga aagctgaacg cattgggcac ggataccaca cacttgaaga 840 tcaaaatctc tacaaacaac tgcttcatca aaacatgcat tttgagatgt gtccagtttc 900 tagcagactg acaggagcct gtgagccaga cttcaccaaa caccctctca tcacattcaa 960 gaaggataaa gcaaactact ccttgaacac agatgaccca accatcttca actccacctt 1020 gaattcagac tatgaggtgg tgcagaaata catggacttc actgaagagg agttcaagag 1080 actgaatata aatgcagcta agtcctgctt tcttcctgaa aaggagaaag agaagcttct 1140 gaatcaactc tatgaggcct acggcatgcg gaaaagcacc agcttttgag aacagctctg 1200 ttgtcaacaa atatgcagcg aacaaagcct ttcaggacat ttgccctttc acaagtgaat 1260 gtgggtcctg attccttgaa acctgaaaaa ctcatgcaca cattttcttt cccataaagg 1320 ccataaatcc atcactcaac acaaataaaa ctatagaagt aaacatgaca ttcatcaaaa 1380 tgttacgtca ttcatatttc attaaccaca tttatagcat aatggtttcc gccaaatgct 1440 gttgcctttc atctctatga atatctacac acaagtattg caatttctgt agcatgaaca 1500 tcacgtattt tgtttttatt gcatatttac tcaagtttaa gccactatac tttacactgt 1560 tctcattata tgcacagtat attatcagaa tataaagacg atgtcttgct aagatgcatt 1620 tcataaaatt aaggggatag ttcacccaaa aaaacttaca tagtttaaat ctcctcaagt 1680 ggttcattca tgagtttctt tcttgttgaa cacaagagaa gatagtttga agaaagctaa 1740 aaacctgtaa ccattaactg ccatggtatg aaaaacaaat accatagaaa tcaatggtta 1800 caggttttca gaattttaaa aatgtacttt tgtgtattgt gaaactgtaa taagtgtgag 1860 taaatgataa caactgtcat tttcggatga actatccctt taaatagtac ctaagctgta 1920 ttacaatggt gagtgagaat gcgtgtattc agtatattaa accagaacgt gtctggtgct 1980 tatttgatgt atatgcatta aaggaacttt tggatggcag tttatgataa tcactaataa 2040 cgatgttatc atgttaccaa gcgtgatgac gaaatgctgt gcaaaatccc tcaagatcgt 2100 gtcattcctt tgatctaaca ccagagggca tttaccaaaa gtggattaat acaactcagg 2160 tttagagatt aagctgcctt ttgaagaata atcgtcaggt tttacttttc tattgtatta 2220 tgtgaaccgc atactctgtg aaggaatgga ctaaagcttt gtcactgtaa agaataaata 2280 agaaaaccgt gtatcaatac aaataaattt ccagctgaaa aaaaaaaaaa aaaaaaaaaa 2340 // |
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