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EBI DbfetchID BC075869; SV 1; linear; mRNA; STD; VRT; 1717 BP. XX AC BC075869; XX DT 08-JUL-2004 (Rel. 80, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE Danio rerio PDZ binding kinase, mRNA (cDNA clone MGC:92050 IMAGE:7045746), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1717 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1717 RG NIH MGC Project RA ; RT ; RL Submitted (06-JUL-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000020676; Danio_rerio. DR Ensembl-Tr; ENSDART00000111193; Danio_rerio. DR ImaGenes; IMAGp998B1614809Q. DR ImaGenes; IRAKp961A07179Q. DR ImaGenes; IRBOp991E0844D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Len Zon, Harvard CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 179 Row: a Column: 7 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 49904352. XX FH Key Location/Qualifiers FH FT source 1..1717 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_10" FT /clone="MGC:92050 IMAGE:7045746" FT /tissue_type="Whole, adult zebrafish" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene 1..1717 FT /gene="pbk" FT /note="synonyms: topk, zgc:92050" FT CDS 56..1075 FT /codon_start=1 FT /gene="pbk" FT /product="PDZ binding kinase" FT /db_xref="GOA:Q6DHU8" FT /db_xref="InterPro:IPR008271" FT /db_xref="UniProtKB/Swiss-Prot:Q6DHU8" FT /db_xref="ZFIN:ZDB-GENE-030523-2" FT /protein_id="AAH75869.1" FT /translation="MEASKESPSAFKTPCKPAKVKSPVNACGTPVTIPASPFMKKLGCG FT TGVNVYLMNRMGKQTHSPWAIKKINSKCAQGQVSVYQKRLCEEAKILKDLKHPNIVGFR FT AFTTAKDGSKCLAMEFGGEQSLNDLIEKRREEGLQAFPVDTIEKVALHVARGLLYLHNE FT KKLLHGDMKSCNVVIKGDFESIKICDVGVSLPLDENMQVSDPKAHYIGTEPWKPKEALE FT DGVITDKADIFAYGLTLWEMMTLSVPHLEMLDTEGDEDDDDESFEEDFDEDAYYERLGS FT RPALDAVTLGGSYQRMVELFCLCTEEDPQKRPSAAHIVQVLESNSQLSKQNTEVIVID" XX SQ Sequence 1717 BP; 505 A; 311 C; 408 G; 493 T; 0 other; gttaatttca atacgggcgc gttgttcggc atatccggag tttacataaa tacaaatgga 60 ggccagcaaa gaatcaccga gtgcctttaa aacaccttgc aagcctgcta aagtgaaaag 120 tccagtcaat gcttgtggga ccccagtcac cattcctgcc tctcccttca tgaagaagct 180 cggctgtggg actggagtca atgtttacct catgaacagg atggggaaac agactcattc 240 tccatgggct ataaagaaga tcaacagcaa gtgtgctcaa ggtcaagtga gtgtttatca 300 gaagcgtctc tgtgaggagg ccaagatctt gaaggacctc aagcacccca atattgttgg 360 cttcagagct tttaccactg cgaaggatgg ctcgaagtgt ctagcgatgg agtttggcgg 420 agaacagtct ctcaatgacc tgattgagaa gaggagagag gagggtctgc aggcctttcc 480 agtggacact attgaaaaag tggctcttca tgtcgctcgc ggtttactgt acttgcacaa 540 tgagaaaaag cttctgcatg gagacatgaa atcatgcaat gttgtcatca agggcgattt 600 tgagagcatc aaaatctgtg atgttggtgt ttcactgcca ctggatgaaa acatgcaagt 660 gagtgatcca aaggctcatt acattgggac ggagccgtgg aagcccaaag aagctttgga 720 ggatggagta atcacagata aagctgatat ctttgcctat ggactcacac tgtgggaaat 780 gatgacgctt tctgttcctc acctggagat gctggacact gagggtgatg aagatgatga 840 tgacgagtca tttgaggagg attttgatga agatgcatat tatgagcggc tggggtctcg 900 accggctctg gacgcagtga ctctgggagg ctcttatcag aggatggtgg agctcttctg 960 tctctgcaca gaggaggacc ctcagaaaag accctcagca gctcacattg tgcaggtgct 1020 ggagtcaaac agccagcttt ccaagcaaaa cactgaggta attgtaatcg attaaatgct 1080 cagttgcatt cctgtcaacg acgaatgctg aaaattctgt ttctccgagt ctgagttgtg 1140 tgtttgagga aaagaacatc atttttgttt tatttcatgc tgtgaactga tgacatttag 1200 aggatctttt tacaaaaaat aattgaaaag gtgccatgtt ttcatactct aatggccatt 1260 tttaacttca gaatggttaa aaaagcaata tatgctggaa taaccctgat tttcattcaa 1320 atcaagtcat aataattgtt attcggactg tttttttttt ttttgtgggg gggggggggg 1380 tggaaggaaa aacacctgga agaaatgtta tcagatcttt tattgaataa aacaaatatt 1440 aacattttcc tgaaccctac ttttactaag aaattgagag aaactcagaa tttgatttat 1500 ttttggttcc cttgctgtat gtttacctct agggatttta ctgtttgaga tctttgtcac 1560 gttgtaaata tgtttctgtt taaaatgagt catgttgcat aaggtcttat gtactctgct 1620 gatttcagac atgctctcga tcatactgta actgcagtca aatttgaaat aaactgtctg 1680 tgaacttcaa aaaaaaaaaa aaaaaaaaaa aaaaaaa 1717 // |
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