EBI Dbfetch

ID   BC075387; SV 1; linear; mRNA; STD; VRT; 1682 BP.
XX
AC   BC075387;
XX
DT   02-JUL-2004 (Rel. 80, Created)
DT   16-JUL-2006 (Rel. 88, Last updated, Version 9)
XX
DE   Xenopus tropicalis kynurenine 3-monooxygenase (kynurenine 3-hydroxylase),
DE   mRNA (cDNA clone MGC:89113 IMAGE:7006634), complete cds.
XX
KW   MGC.
XX
OS   Xenopus (Silurana) tropicalis (western clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Silurana.
XX
RN   [1]
RP   1-1682
RX   DOI; 10.1002/dvdy.10174
RX   PUBMED; 12454917.
RA   Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W.,
RA   Richardson P.;
RT   "Genetic and genomic tools for Xenopus research: The NIH Xenopus
RT   initiative";
RL   Dev. Dyn. 225(4):384-391(2002).
XX
RN   [2]
RP   1-1682
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [3]
RC   NIH-MGC Project
RP   1-1682
RA   Klein S., Gerhard D.S.;
RT   ;
RL   Submitted (28-JUN-2004) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Xenopus Gene Collection (XGC), National
RL   Institute of Child Health and Human Development, 6100 Executive Boulevard,
RL   Room 4B01, Rockville, MD 20892-7510, USA
XX
DR   ImaGenes; IMAGp998H2414707Q.
DR   ImaGenes; IRAKp961K11171Q.
DR   ImaGenes; IRBNp992D0120D.
XX
CC   Contact: XGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Rob Granger, University of Virginia
CC   cDNA Library Preparation: Open Biosystems
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Genome Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
CC   Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
CC   Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
CC   Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
CC   Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
CC   Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
CC   Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
CC   Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
CC   Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 171 Row: k Column: 11
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 55742159.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1682
FT                   /organism="Xenopus (Silurana) tropicalis"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NICHD_XGC_Swb1N"
FT                   /clone="MGC:89113 IMAGE:7006634"
FT                   /tissue_type="Whole body, male, 10 months old, strain F6,
FT                   normal"
FT                   /note="Vector: pExpress1"
FT                   /db_xref="taxon:8364"
FT   gene            1..1682
FT                   /gene="kmo"
FT                   /note="synonym: MGC89113"
FT   CDS             67..1488
FT                   /codon_start=1
FT                   /gene="kmo"
FT                   /product="kynurenine 3-monooxygenase (kynurenine
FT                   3-hydroxylase)"
FT                   /db_xref="GOA:Q6DIZ8"
FT                   /db_xref="InterPro:IPR003042"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6DIZ8"
FT                   /protein_id="AAH75387.1"
FT                   /translation="MEIQGNRKKTVSVVGGGLVGSLNACFFAKKGFQVELYEAREDIRY
FT                   ARMVSGRSINLALSHRGLQALKAVGLDEKIAAMGIPMRARMIHSVKGRKSSIPYGKQHQ
FT                   YILSVDRANLNKELLSAAEKYSNVTMHFEHKLRDCNVDSGTMTFLNNMENIIEKKADLI
FT                   VGCDGAFSVVRKQFMRKSRFNYSHVYIPHGYKELTIPPRKGEFAMEPNYLHIWPRNTFM
FT                   MIALPNLDKSFTCTLFMPFEDFEKLTTGDQVLDFFKTYFPDSIELIGEKKLTEDFFLLP
FT                   PQAMISVKCSSFCIDHKCVIMGDAAHAVVPFYGQGMNAGFEDCLVFSELMEQYQNNLRI
FT                   CLHEFSRLRVPDAHAISDLAMYNYKEMRAHVNSKWFIFRKQVDNILNAIMPTTFIPLYT
FT                   MVTFSRIRYHEVILRWKWQKKIINVGLFTVGTTGSVGAAYLVIKYLPFNKYIEHVGNCL
FT                   THLKGNAYLSRLWAK"
XX
SQ   Sequence 1682 BP; 579 A; 299 C; 322 G; 482 T; 0 other;
     cagctcttag catttaatct gttactctga gatccagaaa aggggaaaac attagcagcc        60
     tccaaaatgg aaatacaagg gaatcggaag aaaactgtat ctgttgtagg agggggtttg       120
     gttggaagcc ttaatgcatg tttctttgct aagaaaggat tccaagtgga gctctatgaa       180
     gcaagggaag atattcgcta tgccagaatg gttagtggaa gaagcatcaa cttggcactt       240
     tcacacagag gacttcaagc tctcaaggct gttggtttgg acgaaaagat tgcagcaatg       300
     ggcatcccaa tgcgtgcaag aatgattcat tctgtaaaag gaagaaaatc tagcatcccc       360
     tatggaaagc aacaccagta tatcctatct gttgacagag ctaatttaaa taaagaactg       420
     ttaagtgctg cagaaaagta ctctaatgtc acaatgcact ttgaacacaa gttacgcgac       480
     tgcaatgttg actctggcac aatgacattt cttaacaaca tggaaaatat cattgaaaaa       540
     aaagctgatt taattgtagg atgtgatgga gccttctctg ttgtacgcaa acaatttatg       600
     aggaagtcac gtttcaatta cagtcatgta tacatacctc atggttataa agaactaact       660
     attccgccaa gaaaaggaga gtttgccatg gagccaaact acctccatat ttggccaaga       720
     aacacattta tgatgattgc acttcctaat ctggacaaat cttttacatg cacacttttc       780
     atgccatttg aagattttga aaaactcact acaggtgacc aagttctgga tttcttcaag       840
     acatactttc cagactccat tgaactaatt ggagaaaaga aattaacaga agacttcttt       900
     ctgctgccac cacaagcaat gatttctgta aagtgttctt cattttgtat tgaccataaa       960
     tgtgttatca tgggagatgc agcacatgca gttgtaccct tctatgggca aggaatgaat      1020
     gcaggctttg aagactgcct tgttttttca gaactaatgg agcaatacca aaacaattta      1080
     agaatctgcc tgcatgagtt ctccaggcta cgagtaccag atgcgcacgc aatatcggac      1140
     ttggctatgt ataactacaa agaaatgcgc gctcatgtca attctaagtg gttcatcttt      1200
     cggaaacagg ttgacaacat tctgaatgcc atcatgccta caacatttat tccactgtat      1260
     acaatggtaa cattcagcag aataagatac catgaagtta tactgcgctg gaagtggcaa      1320
     aaaaagatca taaatgtggg actttttact gttggtacaa ctggatctgt tggtgctgcg      1380
     tatttggtta taaaatactt gccttttaat aaatacattg aacatgtagg taattgttta      1440
     acgcatctga aagggaatgc atacctatca agactgtggg caaaatgaag aaaaaaggca      1500
     aagaattgtg aactgttaca agctgtggcc atatttgttt gtaatataaa ctatattgaa      1560
     tacatttaag tacttaactt ttacacttac actttccttt tcttctggcc ataataaaca      1620
     tttaattaaa atgttcttct taatttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1680
     aa                                                                     1682
//