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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BC074758; SV 2; linear; mRNA; STD; HUM; 952 BP.
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AC   BC074758;
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DT   08-JUL-2004 (Rel. 80, Created)
DT   15-OCT-2008 (Rel. 97, Last updated, Version 5)
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DE   Homo sapiens chromosome 22 open reading frame 31, mRNA (cDNA clone
DE   MGC:103835 IMAGE:30915217), complete cds.
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KW   MGC.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-952
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
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RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-952
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (25-JUN-2004) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
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DR   ASTD; TRAN00000054623.
DR   Ensembl-Gn; ENSG00000100249; Homo_sapiens.
DR   Ensembl-Tr; ENST00000216071; Homo_sapiens.
DR   H-InvDB; HIT000265265.
DR   ImaGenes; IRATp970D10113D.
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CC   On Aug 4, 2004 this sequence version replaced gi:49902319.
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Genome Sequence Centre, British Columbia Cancer
CC   Center
CC   cDNA Library Preparation: British Columbia Cancer Research Center
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Genome Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
CC   Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
CC   Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
CC   Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
CC   Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
CC   Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
CC   Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
CC   Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
CC   Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRBU Plate: 1 Row: E Column: 2.
CC   Differences found between this sequence and the human reference
CC   genome (build 36) are described in misc_difference features below.
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FH   Key             Location/Qualifiers
FH
FT   source          1..952
FT                   /organism="Homo sapiens"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_MGC_267"
FT                   /clone="MGC:103835 IMAGE:30915217"
FT                   /tissue_type="Testes, PCR rescued clones"
FT                   /note="Vector: pCR4 Topo TA"
FT                   /db_xref="taxon:9606"
FT   gene            1..952
FT                   /gene="C22orf31"
FT                   /note="synonyms: bK747E2.1, HS747E2A"
FT   CDS             46..918
FT                   /codon_start=1
FT                   /gene="C22orf31"
FT                   /product="chromosome 22 open reading frame 31"
FT                   /db_xref="HGNC:26931"
FT                   /db_xref="UniProtKB/Swiss-Prot:O95567"
FT                   /protein_id="AAH74758.1"
FT                   /translation="MHPINVRRDPSIPIYGLRQSILLNTRLQDCYVDSPALTNIWMART
FT                   CAKQNINAPAPATTSSWEVVRNPLIASSFSLVKLVLRRQLKNKCCPPPCKFGEGKLSKR
FT                   LKHKDDSVMKATQQARKRNFISSKSKQPAGHRRPAGGIRESKESSKEKKLTVRQDLEDR
FT                   YAEHVAATQALPQDSGTAAWKGRVLLPETQKRQQLSEDTLTIHGLPTEGYQALYHAVVE
FT                   PMLWNPSGTPKRYSLELGKAIKQKLWEALCSQGAISEGAQRDRFPGRKQPGVHEEPVLK
FT                   KWPKLKSKK"
FT   misc_difference 147
FT                   /gene="C22orf31"
FT                   /note="'G' in cDNA is 'A' in the human genome; no amino
FT                   acid change."
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SQ   Sequence 952 BP; 290 A; 242 C; 242 G; 178 T; 0 other;
     tccccttact aagctagcga aaataaaatt taaggcaact gaaatatgca cccaatcaat        60
     gtgagacgag accccagcat ccctatctat ggactccgac agtccatctt attaaatacc       120
     aggcttcagg actgctatgt ggactcgccg gctctcacca acatctggat ggccagaaca       180
     tgtgcaaagc agaacattaa tgccccagca ccagctacca cttcctcttg ggaagttgta       240
     aggaacccat taattgccag ttccttctcc ctggttaagc ttgtactcag gcggcaactg       300
     aagaataagt gctgcccacc accatgcaag tttggagaag gaaaactctc gaagagatta       360
     aagcacaagg acgattcagt gatgaaagcc acccagcagg ccaggaaaag aaacttcatc       420
     agttccaaga gcaagcagcc agcagggcat aggaggcctg caggaggcat cagagagagt       480
     aaagaaagtt caaaggagaa aaaactaaca gtccgccaag atcttgagga cagatatgct       540
     gaacatgtgg ctgccaccca agcgctaccc caggacagtg ggacagcagc ctggaagggc       600
     cgagtgttgc ttcctgaaac ccaaaagaga cagcagttgt cggaggacac gctaaccatc       660
     catggtctcc ccacagaggg ttaccaggct ctgtaccacg ctgtggtgga gccaatgctg       720
     tggaatcctt cagggacccc caagaggtac agcctggagc tgggcaaggc cattaaacaa       780
     aagctctggg aggctctttg cagtcagggt gccatctctg aaggtgctca gagggaccgg       840
     ttccctggca ggaagcagcc aggtgtccac gaggagcctg tactcaagaa atggcccaag       900
     ttaaagagca aaaaatagga acaagaactc atgggattag agtattctct gc               952
//
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