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EBI DbfetchID BC074707; SV 1; linear; mRNA; STD; VRT; 2800 BP. XX AC BC074707; XX DT 29-JUN-2004 (Rel. 80, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 6) XX DE Xenopus tropicalis selenophosphate synthetase 1, mRNA (cDNA clone MGC:69442 DE IMAGE:5335855), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-2800 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2800 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2800 RA Klein S., Gerhard D.S.; RT ; RL Submitted (23-JUN-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998M0811852Q. DR ImaGenes; IRAKp961K06130Q. DR ImaGenes; IRBNp992H0210D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Robert M. Grainger CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: DOE Joint Genome Institute, Walnut Creek, CC California CC Web site: www.jgi.doe.gov CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 130 Row: k Column: 6 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 55742367. XX FH Key Location/Qualifiers FH FT source 1..2800 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Emb7" FT /clone="MGC:69442 IMAGE:5335855" FT /tissue_type="Embryo, Silurana tropicalis, tailbud (stages FT 20-27)" FT /note="Vector: pCMV-SPORT6.1" FT /db_xref="taxon:8364" FT gene 1..2800 FT /gene="sephs1" FT /note="synonym: MGC69442" FT CDS 394..1572 FT /codon_start=1 FT /gene="sephs1" FT /product="selenophosphate synthetase 1" FT /db_xref="GOA:Q6GL12" FT /db_xref="InterPro:IPR004536" FT /db_xref="UniProtKB/Swiss-Prot:Q6GL12" FT /protein_id="AAH74707.1" FT /translation="MSVRESFNPESYELDKSFRLTRFAELKGTGCKVPQDVLQKLLESL FT QENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIAC FT ANVLSDLYAMGVTECDNMLMLLGVSNKLTDRERDKVMPLIIQGFKDAAEEAGTSVTGGQ FT TVLNPWVVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWN FT KIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQ FT QRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGSCPETSGGLLICLPREQAARFCAEI FT KSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVASQNVNPTPGATS" XX SQ Sequence 2800 BP; 834 A; 512 C; 589 G; 865 T; 0 other; gtagcgattc gggactgcgg gctatgtttg ggaattcggg actgttgggc tgtgttagga 60 aaagcgggac tgttgggcag catgaaagct gtgtagggga aggaacgtgc agacacccta 120 gcaactgaaa tccttcccga agtgtgcagc tcactgacag caggggggcc ggtaatccaa 180 agtttccatg ttcatgggta ttctaaaagc aatggatagc cggcctgcag ccttacagtg 240 tgccatatcc tcatgggctt ctttggggtt gtagtgcatc tagaattggc cagtgccagt 300 agtgcaggac ttaaagcagg atctaggttt gttggagagg cgatattcat tcgataagca 360 caaggggggg attaagcaat tcagtcaaaa gccatgtctg ttcgggagtc tttcaatcca 420 gagagctatg agcttgataa gagcttccgc ttgactcgct ttgcagagct gaaaggcact 480 ggttgcaaag ttcctcaaga tgttttgcaa aaactactgg aatctttgca ggagaatcac 540 ttccaggaag atgaacagtt tctaggtgca gtcatgccaa ggcttggaat tggcatggat 600 acatgtgtta ttccattaag acatggtggc ctttctctgg ttcagacaac agactacatt 660 tatcctattg tagatgatcc ttacatgatg ggccgaatag catgtgcaaa tgttttaagt 720 gacctgtacg ccatgggtgt taccgaatgt gacaacatgc tgatgctcct tggtgtcagt 780 aataaactga ctgatcggga aagagacaaa gtaatgcctc tcattatcca aggatttaag 840 gatgctgcag aagaagcagg cacatcggtt acagggggcc aaactgtgct aaacccatgg 900 gttgttctag gtggagttgc aactacagtc tgtcagccaa atgaattcat tatgccagac 960 aatgctgtac caggtgatgt ccttgtgctt accaaacctt tgggaaccca ggtggcagtt 1020 gctgttcatc agtggctaga tattccagaa aaatggaata agattaaact ggtggtcacc 1080 caagaggatg tggagttggc ttaccaggaa gcaatgatga atatggcacg acttaaccga 1140 acagctgctg gcctcatgca cacatttaat gcacatgctg caacagatat aacagggttt 1200 ggaattctag gtcatgcaca gaacttggct aaacaacaac ggaatgaagt ttcttttgtt 1260 atccataacc tgcctgtatt ggccaagatg gctgctgtca gcaaggcctg tggaaatatg 1320 tttggtctta tgcatggatc atgtcctgag acatcgggag gcctgcttat ctgtttgcca 1380 cgggaacagg cagcacgttt ttgtgccgaa attaaatccc ctaagtatgg agagggccac 1440 caagcatgga ttattggaat cgtagaaaag ggcaaccgca ccgccagaat catagacaag 1500 cctcgaatca ttgaggttgc ccctcaagtt gcctctcaaa atgtaaaccc cacacctggt 1560 gccacctctt aatctaggct tacttaactt tttttttgtt aatgtttttt ttgtttttaa 1620 tagaccctat tccttaccat catgcaattt aaataattgt aaagaaaaat atatatatat 1680 aaatatatat caatgtgtcc gcccatttcg agaccttggg tcagttttat gagtgggtat 1740 gatttaatag gtaaaaatca gttttttttt tattttttag tatttttttt tcctttctgt 1800 tacataaact gaagatgcac ctaatcttta aggcagcttc tgagttgaag aatgatattg 1860 ttatctgaaa agcattgatt cattttgaat ctatagacac ttatctcttg ccgcgtaggc 1920 tcttttttaa aggtgctctc actcagcaca gacattgcca ttagtagtgt caaataagca 1980 gttagtgtct tcatttatat atgtgtattt atcattattc gtctgacaat gttggatgcc 2040 tttggaagct catatggaga ggcaataaat cagttgtggg ttctggcata gaagggtgca 2100 tgattccttt ttaaatttaa caattttatt tttgcttggg ctgccgtagc ctttactctt 2160 ccactacctt acattgctta gtaatgcact ccttttactt gtcactgctg gatatatctt 2220 taactctgca tagatcagtt gtaagagtgc tatctttgct taaaaagcac ttctatttag 2280 gaagatatta tttcctcccg tatttacagt accttgaaaa tcgttcttat cagtagcaca 2340 taaacacctt tgcaatgtgg ataaatgtgt tacagaacat aactgcagtt cacttgcaaa 2400 aactaagatt gcctatgtca cttaaatcca gtaattctaa atgtgtagac ataaacacaa 2460 aacacttttt aattataatc aataactttt ctgttctgtg gttgatagtg tttcatacat 2520 ttttatattt tgtatagtga ttacatgcct ttatatgttt tctttataaa tcagcaactg 2580 ttaagtagtt ggtagccatt tcctttccta ctttggtgca tgagtttgtg atctattaaa 2640 acaaaaattg acattgccaa cattgcagct taaactccaa acgtggtatt caaataaata 2700 tttaattttt tttattgctc ttgtaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2760 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2800 // |
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