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EBI DbfetchID BC074045; SV 1; linear; mRNA; STD; VRT; 3205 BP. XX AC BC074045; XX DT 29-JUN-2004 (Rel. 80, Created) DT 19-MAR-2009 (Rel. 100, Last updated, Version 9) XX DE Danio rerio mannosyl (alpha-1,3-)-glycoprotein DE beta-1,4-N-acetylglucosaminyltransferase, isozyme B, mRNA (cDNA clone DE MGC:92425 IMAGE:7039388), complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-3205 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-3205 RG NIH MGC Project RA ; RT ; RL Submitted (23-JUN-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000004115; Danio_rerio. DR Ensembl-Gn; ENSDARG00000010591; Danio_rerio. DR Ensembl-Gn; ENSDARG00000036136; Danio_rerio. DR Ensembl-Gn; ENSDARG00000040730; Danio_rerio. DR Ensembl-Gn; ENSDARG00000052396; Danio_rerio. DR Ensembl-Gn; ENSDARG00000053439; Danio_rerio. DR Ensembl-Gn; ENSDARG00000068769; Danio_rerio. DR Ensembl-Gn; ENSDARG00000076149; Danio_rerio. DR Ensembl-Gn; ENSDARG00000077037; Danio_rerio. DR Ensembl-Gn; ENSDARG00000079160; Danio_rerio. DR Ensembl-Tr; ENSDART00000001159; Danio_rerio. DR Ensembl-Tr; ENSDART00000008994; Danio_rerio. DR Ensembl-Tr; ENSDART00000024292; Danio_rerio. DR Ensembl-Tr; ENSDART00000038391; Danio_rerio. DR Ensembl-Tr; ENSDART00000052474; Danio_rerio. DR Ensembl-Tr; ENSDART00000059667; Danio_rerio. DR Ensembl-Tr; ENSDART00000059670; Danio_rerio. DR Ensembl-Tr; ENSDART00000074230; Danio_rerio. DR Ensembl-Tr; ENSDART00000087334; Danio_rerio. DR Ensembl-Tr; ENSDART00000099265; Danio_rerio. DR Ensembl-Tr; ENSDART00000099583; Danio_rerio. DR Ensembl-Tr; ENSDART00000108939; Danio_rerio. DR Ensembl-Tr; ENSDART00000110291; Danio_rerio. DR Ensembl-Tr; ENSDART00000115340; Danio_rerio. DR ImaGenes; IMAGp998I1814792Q. DR ImaGenes; IRAKp961G23178Q. DR ImaGenes; IRBOp991F0742D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Len Zon, Harvard CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 178 Row: g Column: 23 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 49256692. XX FH Key Location/Qualifiers FH FT source 1..3205 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_7" FT /clone="MGC:92425 IMAGE:7039388" FT /tissue_type="Whole, adult zebrafish" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene 1..3205 FT /gene="mgat4b" FT /gene_synonym="wu:fc25g12" FT /gene_synonym="zgc:92425" FT CDS 128..1771 FT /codon_start=1 FT /gene="mgat4b" FT /gene_synonym="wu:fc25g12" FT /gene_synonym="zgc:92425" FT /product="mannosyl (alpha-1,3-)-glycoprotein FT beta-1,4-N-acetylglucosaminyltransferase, isozyme B" FT /db_xref="GOA:Q6GMK0" FT /db_xref="InterPro:IPR006759" FT /db_xref="UniProtKB/Swiss-Prot:Q6GMK0" FT /db_xref="ZFIN:ZDB-GENE-040704-19" FT /protein_id="AAH74045.1" FT /translation="MRLRNGTFLTVLLFGLCGLISLSWYTAFSNSKGNVVDIYQREFLA FT LRDRLHSAEQENLKRSKELNLVLDEIKRAIAEKQALRDINRTWSSLSDETKLKLWNVTS FT SKNVLQLPSIFHHLPHLLAKESSLQPAVHIGQGRTGVSIVLGVPSVKREVHSYLTDTLS FT SLMTELSPAEKEDCVIVVFIAETDQQYANSVADNLKRLFPGEIQSGLLEIISPSVHFYP FT DFSHLKESFGDPKERVRWRTKQNLDYCFLMMYAQTKGNYYVQLEDDIVARPNYFTTMKN FT FALQQPSEEWMILEFSQLGFIGKMFKSLDLPLIVEFMLMFYKDKPIDWLLDHIMWVKVC FT NPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGKQTLHKGHANPL FT AEVTTSLKTYQHFTLEKAYLGEDFFWAFTPVAGDFIRIRFFTPVRVERYFFRSGNIEHP FT GDKLFNTTVEVLPFDNIQSEKEALKEGREKTPKYQRTEDGFIRIGKFENGIAEGEVDAS FT FGPLEALRLSVLTDSPVWVILSEIFIKKAE" XX SQ Sequence 3205 BP; 875 A; 699 C; 743 G; 888 T; 0 other; ccctctcatc atctcatgtg cgcgcgctgt cattaacgca cgcacgcacg caccgcatca 60 gcagcgcacg ccagacgcgc tcgagcacac ggttcggttc ggacatgata ccggcgcgga 120 cccggagatg aggctcagaa atggcacctt cctaacagtc ttactcttcg ggttatgtgg 180 gcttatatcg ttatcctggt acaccgcatt cagcaattcc aaaggtaatg tggtggacat 240 ttaccagcgt gagtttctgg ccctgagaga ccgtctgcac tccgctgagc aagagaacct 300 caaacgctcc aaagagctca acctggtgct ggacgaaatc aagagagcca tcgctgagaa 360 acaagcactg cgggacatca accgtacctg gagcagcctg tcagatgaga ccaagctgaa 420 gttgtggaac gtgaccagca gtaagaatgt tcttcagctg cccagcatct tccaccatct 480 gccacatttg ctggccaagg agagcagcct tcagccggcg gtgcacatcg gccagggtcg 540 caccggagtg tcgatagtgt tgggggtgcc cagcgtaaag agagaggtgc actcgtacct 600 gacggacacg ctgagctcgc tgatgacaga actgagtcct gcagaaaagg aggactgtgt 660 gattgtcgtc ttcattgcgg agacggatca acaatatgca aatagcgttg ctgacaacct 720 taagcgcctg tttccggggg agattcagtc tggacttttg gagatcattt ctccctctgt 780 ccatttctat ccagacttct ctcacctcaa ggagtcattt ggtgacccta aagagcgggt 840 cagatggcga acaaagcaga acctggatta ctgcttcctg atgatgtacg cccagactaa 900 agggaactat tatgtacagc tagaggatga cattgttgct cggccaaatt acttcaccac 960 gatgaaaaat tttgccctgc agcagccgtc agaggagtgg atgattctag agttttctca 1020 gctgggcttt atcggtaaaa tgttcaagtc attagacctg ccgctgatcg tggagttcat 1080 gctaatgttt tacaaagaca agcccattga ttggctgttg gaccacatca tgtgggtgaa 1140 ggtgtgcaac ccggaaaaag atgcgaaaca ttgtgacaga cagaaagcaa acctacgcat 1200 tcgctttaaa ccatctctct tccagcatgt cggaacacac tcctccctcg ctggaaagat 1260 ccagaaactc aaggataagg actttggaaa gcagacattg cataaaggtc atgctaaccc 1320 gctggctgag gtcaccacca gtctaaaaac gtaccagcac ttcaccctgg agaaggctta 1380 tctaggagag gatttcttct gggcttttac acctgtcgct ggagacttca tacgcattcg 1440 cttcttcaca cctgtccgag tagagaggta tttcttccgc agtggaaaca tcgagcaccc 1500 cggagacaag cttttcaaca ctacagtgga ggttcttcct ttcgacaata tccagtcgga 1560 gaaagaagca ctgaaggagg gaagagagaa gacgccgaag taccagcgca cagaagatgg 1620 cttcatcaga atagggaagt ttgagaacgg catcgcggag ggggaagtgg acgcttcttt 1680 cgggccgctg gaggctctgc ggctctcagt actgacggac tctcctgtgt gggtgattct 1740 cagcgagatt ttcatcaaga aagccgagtg actgaagttc atcaatacct catgacttaa 1800 gcagttgtgt ggtgcaggat tggagactcc tccacatgag ctcctcacag cagtttcttt 1860 agcttggtcc aatagcgcca actgctggcg gcaagctgtt ctagcagggt agagaaggcc 1920 aagccacggc gtcacacaaa agacacacag ctcgcgctgt cagacgcgcc gcagtggctg 1980 gaagacgctg tatttttttg taaactgtat ttatatgtac atatgcccat gattgagttc 2040 ctttaattac actggtttgt tgtcaagggc ttcctggaaa ctctgacatt caacaaaaat 2100 gctgcttttg gaatggaaga ctcttaaatt cctactcgag gttcaatctt tttttttttt 2160 caaagagttg ggtttgttgt tgattagttg acaagtgatt ctgtttaggc ttctccaaat 2220 gatgtattta tattatttat tacgatacat ttgaagtaca cacaggctta tggccatgct 2280 agatatgtgt ttgtttgtgc acaggcctag cgtgtgtggt tttttccaaa gtcagtccaa 2340 acaattcgtt atgatgatga gaaatgtttt aaagtaacta ttagagtatg ctgcaaaacc 2400 atttcttcag aaaattgaag cgctgatttt tcttgtgata attaaatcta tcaaaatgaa 2460 caggatgggg gagccttcag aacttttttg ttgcatcttt ttttattatt gttataattt 2520 ttttactttc taatcaggta gctatagcct attatttctt gcaatatgtt tttttctctc 2580 ctcctcttcc tgccttaatg tgacacagta gtgcgctaat gtggacattt tgtttgtttg 2640 tttggttttt tttttacctt aaagccaaaa actaatatag aaagttagac aaagcaaaat 2700 cctgctcgag aataatctgt acagctcagt gtgagtcaat gcgctggtgt ttagatgctc 2760 ggtttgctct ctggtgatag aaataactca aatattatca gatgctacac agatctgtcg 2820 agggtcctga tttttttatt tccatgcctt aaaatgccat tttctgtaag tgtttagttt 2880 agtaaacagt tcaggcatca gtatacggtg ctgtttgtga actggacagt cgacgtgttt 2940 gagaagatct tacaactgct tttcaaaagg agaaagtttt gtgcagcaaa agaacagcat 3000 ctgacttaaa acaatgctaa gaatcaccat gttgttttac agcacaagca gaatggatat 3060 aaagctgctt caactttcac tggctcttca ttgttttctc ttgattcaat tgatccatga 3120 tctcagatga aaatgtaatg ctcctgtcaa atgatttgaa taaaatcaaa gtccaaaaaa 3180 aaaaaaaaaa aaaaaaaaaa aaaaa 3205 // |
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