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EBI DbfetchID BC072755; SV 1; linear; mRNA; STD; VRT; 4784 BP. XX AC BC072755; XX DT 29-JUN-2004 (Rel. 80, Created) DT 27-MAY-2005 (Rel. 83, Last updated, Version 3) XX DE Xenopus laevis MGC79124 protein, mRNA (cDNA clone MGC:79124 IMAGE:5049474), DE complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-4784 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-4784 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-4784 RA Klein S., Gerhard D.S.; RT ; RL Submitted (07-JUN-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998P1911134Q. DR ImaGenes; IRAKp961C23152Q. DR ImaGenes; IRBHp990B0232D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, CC Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, CC Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, CC Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, CC Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie CC Schein, Asim Siddiqui, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 152 Row: c Column: 23 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..4784 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Ov1" FT /clone="MGC:79124 IMAGE:5049474" FT /tissue_type="Ovary, Xenopus" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT gene 1..4784 FT /gene="MGC79124" FT CDS 193..1803 FT /codon_start=1 FT /gene="MGC79124" FT /product="MGC79124 protein" FT /db_xref="GOA:Q6GQI7" FT /db_xref="InterPro:IPR006759" FT /db_xref="UniProtKB/Swiss-Prot:Q6GQI7" FT /protein_id="AAH72755.1" FT /translation="MRLRNGTVATALVFITTFLSLSWYTAWQNGKEKLMAYQREFHALK FT ERLRIAEHRTLQRSSELHAILDHFRRMIKEANGSRDAFSHFSDETQKLIKDLTNRKALQ FT VPNIYYHMPHLLNHDGSLQPAVQVGLGRTGVSVVMGIPTVKRKVKSYLKETLHSLIDKL FT SPEEKLDCVIIVFIGETDLEYVQSVVANLEKEFATEIGSGLVEVISPPATYYPDLNNLK FT ETFGDSKERVRWRTKQNLDYCFLMMYAQRKGIYYIQLEDDIVAKQNYFSTIKNFALQLS FT SEDWMILEFSQLGFIGKMFQAPDITLIVEFILMFYKEKPIDWLLDHILWVKVCNPEKDA FT KHCDRQKSNLRIRFRPSLFQHVGLHSSLAGKIQKLTDKDFLKPLLHKIHVNPPAEVSTS FT LKVYQGHTLEKTYLGEDFFWAITPVAGDYILFKFDKPVNIERYLFRSGNPDHPGDQLWN FT TTVDVLPYRKDIVELRSDTKENRLPDGFFRIGKFEDGLAEGTVNSNLNPISAFRLSVLH FT NSAVWIILNEIHIKRNPAD" XX SQ Sequence 4784 BP; 1410 A; 900 C; 959 G; 1515 T; 0 other; caggacatta gtgaagcaat gttaacagat tccttcatat ttattaaaac atgaagactt 60 ccgctctttc ctctgggctg ttgctgcaga tttattaatg ctgtgcttgg attgtggata 120 agagatattc atcaccttcc aactgagaaa ctgcatgcag aaaacttgaa accagtgtga 180 tggtgcaatg aaatgaggct ccgaaatgga actgtggcaa ccgcattagt gttcattact 240 acatttttaa gcctttcctg gtatactgca tggcaaaatg ggaaagagaa gttgatggcc 300 taccaacgag aatttcatgc actgaaggag cgcttacgta ttgccgagca caggaccctg 360 cagcgctcgt ctgagctgca tgcaattcta gaccattttc gaagaatgat aaaagaagcg 420 aatggaagca gggatgcatt tagtcatttt tcagatgaaa ctcagaaact gataaaggat 480 ttaactaata gaaaagctct tcaagtgcca aatatatatt accatatgcc tcacttgcta 540 aatcatgatg ggagccttca gcctgctgtg caggttggtc ttgggagaac tggagtgtca 600 gttgtcatgg gaattcctac tgtaaaaagg aaagttaagt cttacctgaa agagaccttg 660 cattccctga tagataagct gtctccagaa gaaaaactag actgtgttat aatagtcttc 720 attggagaga cagatctgga atatgtccag agtgttgttg ccaatttgga aaaagagttc 780 gccacagaaa tcggctctgg tttagtagaa gtaatctctc ctcctgcaac atattatcct 840 gacctaaata atttaaagga gacttttgga gactcaaagg aaagggttcg gtggcgaaca 900 aaacaaaatt tagactattg ttttcttatg atgtatgcgc agaggaaggg catttactac 960 atccagctag aagatgatat tgttgccaag cagaattatt tcagtacaat aaagaatttt 1020 gcacttcagc tttcctctga agactggatg attctggaat tttcccagtt aggatttatt 1080 ggtaaaatgt ttcaggcccc agatattaca ctaattgttg agtttatatt gatgttttat 1140 aaggaaaaac ccattgactg gcttctggac catatattgt gggtgaaagt ttgtaaccct 1200 gaaaaagatg caaaacattg cgacagacag aagtccaatc tgcgaatccg tttccgtcct 1260 tcccttttcc agcatgttgg actccattcg tccttagcag ggaaaataca gaaacttaca 1320 gataaagatt tcctgaaacc attgctgcat aaaattcatg tgaacccacc tgctgaagtc 1380 tccacttcct taaaagtcta tcaaggccac acactggaaa agacttactt gggagaggat 1440 tttttctggg ccattacacc cgttgctgga gactacattc tatttaagtt tgacaagcca 1500 gtgaatatag aaagatatct ttttcgcagc gggaaccctg atcatccagg agatcagtta 1560 tggaacacaa cagtcgatgt ccttccttac cggaaagaca ttgtggaact gaggagtgac 1620 accaaagaaa accgcttgcc ggatggcttc tttagaatag gaaaatttga agacggctta 1680 gcagagggga cagtgaactc taatttaaac cccatttctg catttcggct ttcagtttta 1740 cataactctg ctgtttggat cattctgaat gagatccata ttaaaaggaa tcctgcagac 1800 tgatatccca aaaatgaaga taattccaga actgtcaaaa agcagccaat tcccagtcct 1860 tgtcactgcc tattagggac gtctgcatgc acctccatat catcccgttg tttggactct 1920 acctctgtga gatctactgt agctaggatt acacctgctc ttgtgaaact ccaatggaaa 1980 caatgtgatt tcgtttacct gacacaaaca acccatatca taggcgtaaa caatttttta 2040 ttcaacatat atagattttt tttttttaaa ttactatcat gaaatatgta catatacatt 2100 ccatgagaat tgaagaaaaa atccccaaat gctttttgtg caagaaccaa tattccagtt 2160 ctattttgct tttattatga tacagatttt gtagatcagg gaaatataaa atatattaat 2220 atagatatat ggatacaacc atcttataca gattatttat tatggcttag aaatttgaaa 2280 tgtgcagtaa tatatttgat tgatatgttt ctttaattat atttgacatg ttatgtcatt 2340 gatatgggtt tcctattttc cttgctatgg gagtacaggc tctggtccca taacatttat 2400 gctttactgt accttttttg tggggttttt tggcgagcaa aacattgaaa tttagaatag 2460 cacattccca gttttctgct ttcaacaaag gaatcttatc ccttaaagaa gaaggaatgc 2520 tactgaggca gattattgtc aatagattag ccacaatagt gcaagctata agactatgtt 2580 tattctgtag aatgcttcac catacaggag taaacccctc tcaaagcttt atctggttgt 2640 ttaggatagc agctgccata ttggcttggt gtgacatcac gtcatgctca ctcatagctc 2700 tgggatcaac aggaagagga ggaaagaggg ggagaggcaa gcaaactgag gttgctcaag 2760 ccctagccct ggaggtttaa gctgaaaaca ggaagtctga tacacaaaag cccatgtgta 2820 cacaatagaa ggaaagaaat gcagtgtttc ttttgacaga ggactcaaag cagcattact 2880 ttgagggttt actggtgtat ttactaggga tgcaccgagt tcaggattcg gcctttttca 2940 gcaggattcg gattctgcca aatccttctg cccagctgaa gcgaatctga attctaattt 3000 gcatttgcaa atttggttcg gtatttgccc gaatctttct cgaaggattc gggggttggg 3060 ccgtatccca aatagtggat tcgttgcatc cctagtattt acataaccat tctgataaag 3120 cttacttaat tttagccttt ccttctgctt taagagttat tgtaaaaaag gacttgtacc 3180 attctgttat ttccatcaat agtgttctga gctttgactg tgactgcaaa caagatccta 3240 aagttcagac ccagagatat tgtcttctct tccagtatag gaacatccaa aaacagccct 3300 gctatatccc aatgacttca gtgacaacca tcagtagtgg ttcccttcct aaaatgtgct 3360 ttatagcgtt ctcagacaga ggacctcttc taagagttgt ccagagttat cccattgctg 3420 tcattggtgg ttggcagggg cagattagaa agatgaagcc tctttgcagc tgaaatacac 3480 cattggagga aatgccctct gtgccagacg ttttctattg tccttgttgg ctcaaaattg 3540 ccctgttaaa cgtgcaaggt tttctatgtg tctcggggca aatcaatcaa tacctttgct 3600 ttgcaggaca gtgtcacatt gagggtagtc agtcaagtgg tcacttctaa tgccaataaa 3660 tcttaggaaa gttacatttt tgtgcttacc attaaagggg aactatcgtg aaaatgaaat 3720 tagctttgac atgcttagat ggggaacttt ctagatacaa ttgactagag gttctgtaca 3780 gtttctgaaa taatcgggtt tgtcttcgcg gttcctctct tggcatctgt ttctcttcat 3840 tctctcttcg tgcagcagtt gggtgtggga ggaatgatcc aatatatttt ttatattgtt 3900 tgcctagaac atgtattcga gctcaccaga aatcctgtct ctctacatgt aagatttgtg 3960 caaaaggcag ttgttttgtt agattttgtt tgtactggaa tcaattattt gagtgagctc 4020 taatacatct gctaggaaag ggaccccccc cctataggat atattggatc attcattcgg 4080 cactcaactc ccatgaggac ggagtgaaga gagacagatg ctgagagagg aatggtgaac 4140 ataggcttga tttcagaaac agtacagaat ttttagttgt gtttggaacg tttcttgttt 4200 cagtatgctg aagcttatat taaattttaa ttttcacgat agttcctctt aagttaaaat 4260 acaaagcttc caaatgttca cattctttta cattggaggt cagtaaataa tttgtgcttt 4320 tggttttatt acttcctttg tgaatctatt ctgcattgag ttaaaagtgc ctaaaccagg 4380 cattgtttat aagtacactt attataaatg atttactgcc tttttttcaa ttccgctctg 4440 caagttggat gtgctgttcc gttgtgctag atcatttcta ttcacaaggc agctaattac 4500 tgcacagcgt ttcatgttgc tttaatgatg cagctaatga acttttacct ttgctctgct 4560 tctatgtccc caaacaaaat ctcagcaaaa atgtctggta ttttctaaaa gtgattaact 4620 attataaagc aacctctttg gttgaaagca cccgattgct gcagggacct gattgttcct 4680 ttcttgctta ttctaaccag tctacatatt tagtaaaaaa taaaaacact tgccctttgg 4740 tttaaaaata aagttttact tttttctaaa aaaaaaaaaa aaaa 4784 // |
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