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EBI DbfetchID BC072745; SV 1; linear; mRNA; STD; VRT; 1883 BP. XX AC BC072745; XX DT 29-JUN-2004 (Rel. 80, Created) DT 27-MAY-2005 (Rel. 83, Last updated, Version 3) XX DE Xenopus laevis MGC79100 protein, mRNA (cDNA clone MGC:79100 IMAGE:5048331), DE complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-1883 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1883 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1883 RA Klein S., Gerhard D.S.; RT ; RL Submitted (07-JUN-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998A0411132Q. DR ImaGenes; IRAKp961B12152Q. DR ImaGenes; IRBHp990B1131D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, CC Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, CC Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, CC Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, CC Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie CC Schein, Asim Siddiqui, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 152 Row: b Column: 12 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..1883 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Ov1" FT /clone="MGC:79100 IMAGE:5048331" FT /tissue_type="Ovary, Xenopus" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT gene 1..1883 FT /gene="MGC79100" FT CDS 71..1813 FT /codon_start=1 FT /gene="MGC79100" FT /product="MGC79100 protein" FT /db_xref="GOA:Q6GQJ7" FT /db_xref="HSSP:1BS2" FT /db_xref="InterPro:IPR001278" FT /db_xref="InterPro:IPR001412" FT /db_xref="InterPro:IPR005148" FT /db_xref="InterPro:IPR008909" FT /db_xref="InterPro:IPR009080" FT /db_xref="InterPro:IPR014729" FT /db_xref="InterPro:IPR015945" FT /db_xref="UniProtKB/Swiss-Prot:Q6GQJ7" FT /protein_id="AAH72745.1" FT /translation="MAWHFRRVIAEQVSRVLGLPSESCSRVAQCIQTVPVHRKHESPDF FT QLFMTSLSEGGPNGTFSNQEERAEQLAGKLVCDSVISDIGTTRGSVTFKINRDLLTRNV FT LQQISKDGSLYGLNTELFSELSRRKTIVEYSSPNIAKKFHVGHLRSTIIGNFIANLKQA FT VGNEVVRINYLGDWGLQFGLLGAGFSSFGSKEKLLANPLQHLFEVYVKVNTAAEKDNGI FT KLSAQEFLRRLEGGDPHALSLWMHFRDISIQEYAKIYKRLGAHFDDYSGESFYKEKSQE FT VLKQLESKGLLLKTDKGTVIDLSEEGNLSSYSTVMRSDGTSLYITRDMAAAVDRMERYN FT FDEMIYVTDKSQKNHFQQLFKILKIMGKDQADRCQHVPFGLVQGMKTRRGEVVFLEDVL FT DEARSRMLQNMAASETSKQLDDPSDTAEKIGIAALIVQDFKGQLVSDYHFDWDQALQST FT GDTGVFLQYTHARLHSLQALRCPRDTEDFEIASLREPCVIATLQHLLRYDEVIYKCLED FT LQPRYLVTYLLSLGHLANVAHRTLQVKGSSSEAAHARLLFFKNVQMVLGNGMKLLGITP FT VNNM" XX SQ Sequence 1883 BP; 591 A; 351 C; 446 G; 495 T; 0 other; atgaaatgct gtgcctgtaa tagtcggtgt atgtgctgag tgaataaccc gtgggaagtg 60 cagtaaggca atggcttggc actttcggag ggtaatagct gagcaggttt cacgggtttt 120 gggcttgcca tccgaaagtt gcagcagagt tgcccagtgc attcaaacag ttccagtcca 180 cagaaaacat gagtcccctg atttccagct ttttatgact tcactgtcag aaggtggtcc 240 taatggaaca ttcagtaatc aggaggaaag agctgaacaa cttgcaggaa agcttgtctg 300 tgattctgtg attagtgaca ttggcacaac cagaggatca gttactttta aaataaaccg 360 ggatttgtta acaaggaatg ttttgcagca gataagtaaa gatgggtctc tttacggact 420 taacacagag cttttctcag agttatcccg aagaaagaca atagtggaat acagttcacc 480 caatattgcc aaaaaattcc atgttgggca tctgcgctcc acaatcattg gaaatttcat 540 cgctaacctt aaacaagcag ttggaaatga ggttgtaaga ataaactatc tcggagactg 600 gggtcttcag tttggccttt tgggagctgg atttagcagc tttggtagca aagagaaact 660 tctagctaac ccactgcaac atctatttga agtttacgtg aaagtcaaca cagcagccga 720 gaaagataat ggtataaagt tgtcggctca ggagttttta agaaggctag agggtggaga 780 cccacatgca ctgtctctgt ggatgcattt cagagacata agcattcagg aatatgctaa 840 aatctataag cgtcttgggg cacattttga tgattattct ggtgaatcat tttacaaaga 900 gaaatcacag gaggtcctga agcagcttga aagcaaagga ttgctactga aaacagataa 960 gggcactgta attgatctat cagaagaagg aaacctttca tcctactcaa ctgtgatgcg 1020 aagcgatgga acatccctgt atattacaag agatatggct gctgcagttg atcgaatgga 1080 aagatacaac tttgacgaga tgatttatgt gacagacaaa agtcagaaga atcattttca 1140 acagctattc aaaattttga agattatggg aaaagatcaa gcagatcgct gccaacatgt 1200 accttttggc ctagttcagg ggatgaaaac aagaagagga gaggtggttt ttctggaaga 1260 tgtattggat gaagctcggt ccaggatgtt gcaaaatatg gcagcaagtg aaacaagtaa 1320 acaacttgat gacccttctg ataccgctga aaagataggg attgctgctc tcattgtaca 1380 ggatttcaag gggcagcttg tatccgacta ccactttgac tgggatcagg ccctacagag 1440 tactggagat actggtgtct ttttgcagta tactcatgca aggctgcaca gcctgcaggc 1500 tctgcggtgc cccagggaca cagaagactt tgagatcgca agtctgagag agccatgtgt 1560 gatcgcaact ctgcaacatc ttctcaggta cgatgaagtg atatacaagt gtttagaaga 1620 cttgcagccc agatatctgg taacatacct cctgagcctt ggccatcttg ccaatgtggc 1680 ccatcgaaca ctgcaggtta agggaagttc ttcagaagca gctcatgccc gtcttctttt 1740 tttcaagaat gtacaaatgg ttctgggcaa tgggatgaaa cttctcggca ttacccccgt 1800 taacaatatg taaatgattt gtaggcaaca atatccattt ttattaaaat ttaaaaaaaa 1860 aaaaaagaaa aaaaaaaaaa aaa 1883 // |
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