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EBI DbfetchID BC072704; SV 1; linear; mRNA; STD; VRT; 1315 BP. XX AC BC072704; XX DT 29-JUN-2004 (Rel. 80, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 4) XX DE Danio rerio mitochondrial trans-2-enoyl-CoA reductase, mRNA (cDNA clone DE IMAGE:7036761), partial cds. XX KW . XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1315 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1315 RG NIH MGC Project RA ; RT ; RL Submitted (07-JUN-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ImaGenes; IMAGp998L0714785Q. DR ImaGenes; IRAKp961C07178Q. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Len Zon, Harvard CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 178 Row: c Column: 7 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 49117347. XX FH Key Location/Qualifiers FH FT source 1..1315 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_7" FT /clone="IMAGE:7036761" FT /tissue_type="Whole, adult zebrafish" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene <1..1315 FT /gene="mecr" FT /note="synonym: zgc:110153" FT CDS <1..1243 FT /codon_start=2 FT /gene="mecr" FT /product="mecr protein" FT /db_xref="GOA:Q6GQN8" FT /db_xref="InterPro:IPR002085" FT /db_xref="InterPro:IPR011032" FT /db_xref="InterPro:IPR013149" FT /db_xref="InterPro:IPR013154" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q6GQN8" FT /db_xref="ZFIN:ZDB-GENE-050417-399" FT /protein_id="AAH72704.1" FT /translation="QNGRSQDSKHGFLISRVFFKDIRRRYFEIERITGDKMKLPSVASL FT LIRVYRTTGPVSHIQRIRHGAVLNKNYSSVSAVKNCTALLYRNHGEPSQVVQLESLDLP FT QVGAECVLVKMLAAPINPSDLNMLQGTYAILPELPAVGGNEGVAQVMEVGDKVKTLKVG FT DWVIPKDAGIGTWRTAAVLKADDLVTLPKDIPVLSAATLGVNPCTAYRMLTDFEELKAG FT DTVIQNAANSGVGQAVIQIAAAKGIHTINVIRDRPDLRQLSDRLTAMGATHVITEETLR FT RPEMKELFKSCPRPKLALNGVGGKSATELLRHLQSGGSLVTYGGMAKQPVTVPVSALIF FT KDVRVRGFWVTQWKRDNRHDDEALRHMLDELCILIRAGKLSAPICTQVQLQDFRKALEN FT AMKPYVSTKQVFVM" XX SQ Sequence 1315 BP; 397 A; 298 C; 327 G; 293 T; 0 other; ccaaaatggc cgctcacagg atagtaaaca tggatttttg atctctcgtg tgtttttcaa 60 agatatacga cgacgatatt ttgaaattga acgcataaca ggggataaaa tgaaactgcc 120 gtccgtcgca tcgctattaa ttcgcgttta cagaacaaca ggtcctgtgt cacacattca 180 gaggatcaga catggagctg tcctcaataa aaactattca tctgtgtctg cagtcaaaaa 240 ctgcactgca ctcctgtaca ggaatcacgg ggagccctca caagttgtcc agttggagtc 300 tctggatctt cctcaggtgg gagctgaatg tgtcctagtg aaaatgctag cggctcccat 360 caacccttct gacttaaata tgcttcaagg cacatatgcc atcctgcctg agcttccggc 420 agtggggggc aatgagggtg tggctcaggt gatggaggtg ggagacaagg tcaaaacact 480 caaagtgggc gactgggtga ttccaaaaga tgctggcata ggcacatgga gaacagcagc 540 agttttaaag gctgacgatc tggtgacttt acctaaagac attcctgtac tgtccgcagc 600 cactctgggg gtcaatccat gcaccgctta taggatgctc acagactttg aggagctcaa 660 agcaggagac acagtgatcc agaatgccgc taacagtggt gttggacagg ctgttattca 720 gatcgctgct gctaaaggca ttcacaccat taatgtcatc agagacaggc cggatctgcg 780 gcagctctca gacagactga cagcgatggg cgccacacac gtcattacag aagagactct 840 gagacggcca gagatgaagg agctctttaa gtcctgtcct cgacctaaac tggcactgaa 900 tggagttgga ggaaaaagtg ccacagaact attacgccat ttacaaagtg gagggagttt 960 ggtgacctac ggtgggatgg ccaaacaacc agtcactgtt ccagtgagtg cgctgatctt 1020 taaagacgtg agagtaagag gtttttgggt gacccagtgg aagagagaca acagacacga 1080 tgatgaagcc ttacgacaca tgctggatga actctgcatc ctgatccgcg ctgggaaact 1140 gtcggctcca atctgcacac aagtacagct tcaagacttc cggaaagctc tagaaaacgc 1200 catgaagccg tatgtgtcca ccaaacaggt ttttgtcatg tgaatgcaac cccaaacaca 1260 tgtataataa acatgacatc aaagtccaaa aaaaaaaaaa aaaaaaaaaa aaaaa 1315 // |
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