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EBI DbfetchID BC070970; SV 1; linear; mRNA; STD; VRT; 2804 BP. XX AC BC070970; XX DT 20-MAY-2004 (Rel. 79, Created) DT 19-MAR-2009 (Rel. 100, Last updated, Version 4) XX DE Xenopus laevis probable glutathione peroxidase 8-A, mRNA (cDNA clone DE MGC:78781 IMAGE:3401365), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-2804 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2804 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2804 RA Klein S., Gerhard D.S.; RT ; RL Submitted (18-MAY-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998A148301Q. DR ImaGenes; IRAKp961D14149Q. DR ImaGenes; IRBHp990G0318D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Martha Rebbert, Steven L. Klein, Ph.D. CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 149 Row: d Column: 14 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 47507403. XX FH Key Location/Qualifiers FH FT source 1..2804 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Emb1" FT /clone="MGC:78781 IMAGE:3401365" FT /tissue_type="Embryo, stage 10" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT gene 1..2804 FT /gene="MGC78781" FT CDS 176..805 FT /codon_start=1 FT /gene="MGC78781" FT /product="MGC78781 protein" FT /db_xref="GOA:Q6IRC8" FT /db_xref="HSSP:2F8A" FT /db_xref="InterPro:IPR000889" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013376" FT /db_xref="UniProtKB/Swiss-Prot:Q6IRC8" FT /protein_id="AAH70970.1" FT /translation="MEPLNPYPVKFSSPKAKVSVVFLSMLLCTGILCVLQLGFLRAKGG FT DFYSYEVTDAKGRAVALSKYRGKASLVVNVASGCPHAEANYRSLQELHREFGPSHFTVL FT AFPCNQFGESEPGTNQEIGALAKRNYGVTFPMFSKIKILGSEAEPAYRFLVDSTKKEPR FT WNFWKYLVDPQGQVVKYWRPDETAESIRPEVASLVRQIIMKKKEEL" XX SQ Sequence 2804 BP; 781 A; 553 C; 592 G; 878 T; 0 other; ggggaatgcc gggacttgta gtggaacagc cggattgaac tttagcgcct ccgcacggac 60 ttcccaagat cctcagctga acattatttc cctgcgtgtc accgactgag ccacgggctg 120 ctcctcccaa ccgcattcct gggacttgct cagacttctc cgctgagcct ccaacatgga 180 gccgctaaac ccctaccccg tgaagttctc ttcccccaaa gccaaagtct ccgtggtgtt 240 cctctcaatg cttctctgca ccgggatcct gtgtgtcctg cagctcggct tcctcagggc 300 caaaggggga gacttctact cgtacgaggt gacggatgcc aagggcagag ctgtggccct 360 atctaaatac aggggcaaag cgtctctggt tgtaaacgtg gccagtggct gcccgcacgc 420 tgaggcaaac tacagatctc tgcaggagct gcacagggag tttggccctt cccatttcac 480 cgttttagct ttcccttgca atcagtttgg ggagtcggag cccggcacta accaggagat 540 aggggctttg gccaaaagga attatggagt gactttcccc atgttcagca aaataaagat 600 cctgggctca gaggcagagc cagcctatag gttccttgtt gattcaacta aaaaagaacc 660 acgatggaat ttctggaaat atctggttga cccccaaggc caagttgtga aatactggag 720 gcctgatgag actgctgaga gtatccggcc tgaagtggcc tctttagtca ggcaaataat 780 catgaagaag aaagaagaac tctgaaataa tgtgtggtca atggcactgg actattctta 840 gaaagaaaac tccccagaat tgtttatatc tttttaggtt aaattgtggt tattttgtac 900 tttttgtaaa cccttttgtc aactgaacac ttgtcagtgt gtatgtgtcc ctttttacaa 960 atgtaacatt tcaataactt gcttttgcaa gatttatggg gtagaacgtt ggctcaagaa 1020 tctcatttta aataggcaag aacgagttct agaaactgag atgtcttgtc caacatgatg 1080 gggcagattt atcaagggtc gaattgaaaa ttcgaaattc taattttttt gtggtcaaaa 1140 ctagatttga ttttcaagat ttataatact caggcccttt aagaacttga attcgactat 1200 tcgccaccta tagcctgctg aattgctgtt tgagtcggtg ggagacgtcc agggatcaat 1260 ttggagttga ttgaagcctt cctgacattc aagttttttt ctaatcaagt tttcaggtcg 1320 atataattca tccgactttt taaatttcta tttttttaat acatttcgat tggtcgaatt 1380 tatgggagtt tttatctgaa aatatctcat tatttaaaat atctcataaa cccctagatg 1440 tttgacaact atgtatgtat gtaaagattt atgtgtccct gcttcacctt cagcagtcgc 1500 attccccgta gtactacatg gactggcccc cagtgcatgt ttcaatgaag taaggccata 1560 ttaaacccca agcctgggct tttcttctat ccattacagg gctctaacta cttgtttgtg 1620 ttaaaacttt tatttggctc atgatttttg attttgattg tcatacacac ttctggccgc 1680 caggacttcc agtccaacac ttcttggggt ttgaatgagt tcctgaacat gaagccagag 1740 aagatggtgt gagtgcaata tatacagtca tatgcaaaaa tttgggaaca cctcttaatt 1800 ctttggagtt ttgtttatca ttggctgagc tttcaaagta gcaacttaat atataacatg 1860 ccttatggaa acagtagtat ttcagcagtg acataaagtt tattggatta acagaaaata 1920 tgcatcataa caaaattaga cggtgtataa aattgggcac cccaacaggg atattacatc 1980 aatacttagt tgagcctcct tttgcaaatg gaataacctt tgatgagtgt ctgaatggtg 2040 gtatttttga cctttcgtcc agttcaattg aatttgttgt acttctccct ctgcataaat 2100 ttgttgtact tctccctctg cataaaggta gatttcgagg tgtgtttaga gtcattgtta 2160 aaagaacagg ttcgtgtata gttgccctat aatatgccca attccccaag gttaaaacat 2220 actgatcaat tcgtcttaag cttaatcatt tgtacaccct attcagttta taatatactt 2280 tttgtgaact ggagatcact ctttgttaac tatgccccat aaagtcaata gcacttcaat 2340 acaagaaagt aacatgctag gtctgcgtta gtaattcaac aaagagtgta ctggtatggg 2400 gcttgatatc cagaatgctt ggggccttgg gttttcagat atttccgtag tttggatctt 2460 tgttccttgg gtctactgga gaatcatgta aacattgaat aaacccgggg ggctggtttt 2520 gctttcagta aggatttatt gtatcttagt tgggatcaag tacaaggaac cgttttatta 2580 ttacatagaa aaaggaaatc gtttggatta tttggatgag atggagtcta tgaaagatgg 2640 tcattttgta attctaaact ttctggataa tgggattccg gataatggat cccttacctg 2700 tataaggatt taaaacctca aatgcataag ccaaagagtt atgctataaa cagtggctta 2760 acaaaatgta tggttctata cacaaaataa aaaaaaaaaa aaaa 2804 // |
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