EBI Dbfetch

ID   BC068755; SV 1; linear; mRNA; STD; VRT; 1551 BP.
XX
AC   BC068755;
XX
DT   07-APR-2004 (Rel. 79, Created)
DT   19-MAR-2009 (Rel. 100, Last updated, Version 4)
XX
DE   Xenopus laevis Acetyl-CoA acetyltransferase A, mitochondrial, mRNA (cDNA
DE   clone MGC:81256 IMAGE:6631266), complete cds.
XX
KW   MGC.
XX
OS   Xenopus laevis (African clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Xenopus.
XX
RN   [1]
RP   1-1551
RX   DOI; 10.1002/dvdy.10174
RX   PUBMED; 12454917.
RA   Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W.,
RA   Richardson P.;
RT   "Genetic and genomic tools for Xenopus research: The NIH Xenopus
RT   initiative";
RL   Dev. Dyn. 225(4):384-391(2002).
XX
RN   [2]
RP   1-1551
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [3]
RC   NIH-MGC Project
RP   1-1551
RA   Klein S., Gerhard D.S.;
RT   ;
RL   Submitted (02-APR-2004) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Xenopus Gene Collection (XGC), National
RL   Institute of Child Health and Human Development, 6100 Executive Boulevard,
RL   Room 4B01, Rockville, MD 20892-7510, USA
XX
DR   ImaGenes; IMAGp998L1814198Q.
DR   ImaGenes; IRAKp961O14156Q.
DR   ImaGenes; IRBHp990C0921D.
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CC   Contact: XGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Martha Rebbert, Steven L. Klein, Ph.D.
CC   cDNA Library Preparation: Life Technologies, Inc.
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Genome Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
CC   Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
CC   Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
CC   Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
CC   Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
CC   Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
CC   Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
CC   Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
CC   Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 156 Row: o Column: 14
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 46249539.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1551
FT                   /organism="Xenopus laevis"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NICHD_XGC_Emb1"
FT                   /clone="MGC:81256 IMAGE:6631266"
FT                   /tissue_type="Embryo, stage 10"
FT                   /note="Vector: pCMV-SPORT6"
FT                   /db_xref="taxon:8355"
FT   gene            1..1551
FT                   /gene="acat1-a"
FT   CDS             129..1391
FT                   /codon_start=1
FT                   /gene="acat1-a"
FT                   /product="acat1-a protein"
FT                   /db_xref="GOA:Q6NU46"
FT                   /db_xref="HSSP:1AFW"
FT                   /db_xref="InterPro:IPR016038"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6NU46"
FT                   /protein_id="AAH68755.1"
FT                   /translation="MAFCGTRTAARLSHSTRALHNTHRNFASQRTLNEVVIASAARTPI
FT                   GSFQGTLSSLPATKLGSIAIKAAVERAGIPADEVKEVYMGNVLQAGQGQAPSRQATLGA
FT                   GLAISTPTTTINKVCASGMKSVMLAAQSLMCGHQQVMVAGGMESMSNVPYCMSRGATPY
FT                   GGVKLEDLIVKDGLTDVYNKIHMGNCAENTAKKFSISREEQDSFAIHSYTRSKAAWDSG
FT                   LIANEIAPVTIAQKGKPDIIVQEDEEYKRVDFSKFPKLKTVFQKDNGTVTAANSSTLND
FT                   GAAALLLMTTEAANRLNVTPLARIVAFADAAVDPIDFPIAPAYAVPKLLSEAGLKKEDI
FT                   AMWEINEAFSVVVLANIKMLGIDPARVNMNGGAVSLGHPIGMSGARIVGHMAHALKKGQ
FT                   FGIAGICNGGGGASAVLIEKL"
XX
SQ   Sequence 1551 BP; 442 A; 362 C; 396 G; 351 T; 0 other;
     gctttgagcc aataggatcc gggggctggt cagaggcgct tatatgattg gtggttggaa        60
     gaggtgcttt ttggctagag gtgactcgga ggtgccctga gcaggctgac agtgtccatc       120
     ccacagccat ggctttctgc ggcactcgta cagctgctcg tctctcacac tccactcggg       180
     cattgcacaa cacacacagg aactttgcat ctcagcgcac attaaatgag gtggtgatcg       240
     caagtgcagc tagaacccca attgggtctt tccaagggac tctgtcgtca ctcccagcaa       300
     ctaaacttgg ttctattgcc attaaagctg ccgttgagag agcaggtatc ccggcagatg       360
     aagtgaagga ggtttacatg ggcaatgttc tccaagctgg ccaggggcaa gcaccctcga       420
     ggcaggctac acttggtgca ggcctggcca tctccactcc cacaaccacc atcaacaaag       480
     tgtgtgcgtc ggggatgaaa tccgtcatgc ttgcggcaca gagcctcatg tgtggccatc       540
     agcaagtgat ggtcgccggc gggatggaga gtatgtccaa tgttccttat tgcatgagca       600
     gaggggccac gccgtacgga ggagtgaaac ttgaagatct tatagtaaaa gatggactca       660
     ccgacgtcta taacaaaatc cacatgggaa attgcgcaga aaacacagcc aagaagttca       720
     gcattagccg agaggaacaa gacagctttg ccattcactc ctacacccga agcaaagcag       780
     cgtgggactc cggtctgata gccaatgaaa ttgcaccagt taccattgca caaaaaggaa       840
     agcctgatat cattgtgcaa gaagatgaag agtacaagcg cgttgacttc agtaaattcc       900
     ccaaactgaa gaccgtcttc caaaaggaca acgggacagt gaccgctgcc aactccagca       960
     cattgaatga cggagctgct gctttgctcc ttatgacgac agaggccgca aaccgactca      1020
     atgttacacc cctcgcaagg attgtagcat ttgccgacgc tgctgtagat cccattgatt      1080
     ttcccatagc acctgcctat gccgttccta agctactgag tgaagccggg ttgaagaaag      1140
     aagacattgc aatgtgggaa ataaatgagg cctttagtgt ggtggtattg gctaatatta      1200
     aaatgctggg cattgatcct gccagagtca acatgaatgg tggggcagtg tccctgggac      1260
     atcctatagg aatgtccggc gctaggattg ttggccacat ggctcatgcg ctgaagaaag      1320
     gccagtttgg catcgctgga atctgcaacg gtggaggagg agcatctgca gttctgattg      1380
     agaagctcta gggtctgact ctttactgtt ctgagactca ttcaaccata aaccatgcac      1440
     tttgtgatca gagagtctct ttgtctctct ttacactcaa taaatcagtt tgttttatag      1500
     taaaaaaaaa agagagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a               1551
//