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EBI DbfetchID BC067344; SV 1; linear; mRNA; STD; VRT; 1151 BP. XX AC BC067344; XX DT 22-MAR-2004 (Rel. 79, Created) DT 31-MAR-2005 (Rel. 83, Last updated, Version 5) XX DE Danio rerio cysteine dioxygenase, type I, mRNA (cDNA clone MGC:77945 DE IMAGE:7000935), complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1151 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1151 RG NIH MGC Project RA ; RT ; RL Submitted (12-MAR-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ImaGenes; IMAGp998G1414693Q. DR ImaGenes; IRAKp961J09147Q. DR ImaGenes; IRBOp991C0735D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Len Zon, Harvard CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, CC Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, CC Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, CC Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, CC Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie CC Schein, Asim Siddiqui, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 147 Row: j Column: 9 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 41152242. XX FH Key Location/Qualifiers FH FT source 1..1151 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_10" FT /clone="MGC:77945 IMAGE:7000935" FT /tissue_type="Whole, adult zebrafish" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene 1..1151 FT /gene="cdo1" FT /note="synonyms: MGC73181, zgc:73181, zgc:77945" FT CDS 24..629 FT /codon_start=1 FT /gene="cdo1" FT /product="cdo1 protein" FT /db_xref="GOA:Q6NWZ9" FT /db_xref="InterPro:IPR010300" FT /db_xref="InterPro:IPR011051" FT /db_xref="UniProtKB/Swiss-Prot:Q6NWZ9" FT /db_xref="ZFIN:ZDB-GENE-040426-1704" FT /protein_id="AAH67344.1" FT /translation="MEQTEVMKPETLEDLIKTLHQIFQSDSINVEEVQNLMESYQSNPQ FT DWMKFAKFDQYRYTRNLVDEGNGKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGQLKE FT TLFDWPDRKLQSGMKPRGQSVLQENQCAYINDSLGLHRVENVSHTEPAVSLHLYSPPFQ FT SCRTFDQRTGHHNTVKMTFWSKYGERTPYELSVSQENN" XX SQ Sequence 1151 BP; 297 A; 297 C; 310 G; 247 T; 0 other; gcagagctga gttagagatg gacatggagc agactgaagt catgaagccc gagactctgg 60 aggatctgat caaaactctg catcagatct tccagagcga ctccatcaat gtggaggagg 120 tgcagaacct gatggagtcc taccagagca acccgcagga ctggatgaag ttcgccaagt 180 tcgaccagta caggtacacc aggaacctcg tggatgaagg aaacggaaag ttcaacctga 240 tgatcctgtg ctggggtgaa ggacacggca gcagcatcca tgaccacaca gactcgcact 300 gcttcctgaa gctgctgcag ggtcagctga aggagacgct gtttgactgg cccgaccgca 360 agctgcagag cggcatgaag ccccgcggcc agagcgtgct gcaggagaac cagtgcgcgt 420 acatcaacga ctctctgggc ctccaccgtg tggagaatgt gagccacaca gagccggccg 480 tgagtctgca cctctacagt cctccgttcc agagctgccg cacgtttgac cagcgcaccg 540 gacaccacaa caccgtcaag atgaccttct ggagcaaata tggcgagagg acgccctatg 600 agctgagcgt ctcgcaggag aataactgac cgtccagacc ctgatcaaca ctctgagaca 660 gcgggacggg gggcgctgta gttaaacttg cgtaacgctg gcccactttg agtctgaata 720 gacgcattag tcctcaatct gctctttgtt gctggaggac cggcgtttcc cagcattcct 780 ctgcgtctgt cagctgtgta atcacgcttt tgtgctgctg cgggactgaa gagctgagga 840 gtgtaaatat gagcgcaaca cacacacaca catgcgcgcg cacacacacg ctccccaaca 900 cacacacagc tctcccacac cagcgtcctc ccagagtctg ttcttacgaa tcgtgctgtc 960 tgtaattgtg catgtgtgtg tgtgtgtgtt tgcgagcgtg cgtgcgtgcg tgtgtgtgtg 1020 cgtgtgtgtg tgtgtctgca tttgtaaact gaagctttta tttaaaatct tacctggaaa 1080 tgatttattg tcttaacatt tcagtaaata aagaaggtta tcctgcaaaa aaaaaaaaaa 1140 aaaaaaaaaa a 1151 // |
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