EBI Dbfetch

ID   BC065611; SV 1; linear; mRNA; STD; VRT; 1548 BP.
XX
AC   BC065611;
XX
DT   28-JAN-2004 (Rel. 78, Created)
DT   21-OCT-2008 (Rel. 97, Last updated, Version 11)
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DE   Danio rerio carbonic anhydrase, mRNA (cDNA clone MGC:77128 IMAGE:6960975),
DE   complete cds.
XX
KW   MGC.
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OS   Danio rerio (zebrafish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
XX
RN   [1]
RP   1-1548
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-1548
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (26-JAN-2004) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
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DR   Ensembl-Gn; ENSDARG00000011166; Danio_rerio.
DR   Ensembl-Tr; ENSDART00000013411; Danio_rerio.
DR   ImaGenes; IMAGp998F1414595Q.
DR   ImaGenes; IRAKp961A10146Q.
DR   ImaGenes; IRBOp991G0731D.
XX
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Leonard I. Zon, M.D.
CC   cDNA Library Preparation: Invitrogen Corp
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: National Institutes of Health Intramural
CC   Sequencing Center (NISC),
CC   Gaithersburg, Maryland;
CC   Web site: http://www.nisc.nih.gov/
CC   Contact: nisc_mgc@nhgri.nih.gov
CC   Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
CC   Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
CC   Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
CC   Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
CC   Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
CC   McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
CC   Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
CC   Young,A., Zhang,L.-H. and Green,E.D.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 146 Row: a Column: 10
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 41351396.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1548
FT                   /organism="Danio rerio"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NCI_CGAP_ZKid1"
FT                   /clone="MGC:77128 IMAGE:6960975"
FT                   /tissue_type="Kidney, zebrafish"
FT                   /note="Vector: pCMV-SPORT6.1"
FT                   /db_xref="taxon:7955"
FT   gene            1..1548
FT                   /gene="cahz"
FT                   /note="synonyms: cah, CAH-Z, cb588, 5016, id:ibd5016"
FT   CDS             59..841
FT                   /codon_start=1
FT                   /gene="cahz"
FT                   /product="carbonic anhydrase"
FT                   /db_xref="GOA:Q92051"
FT                   /db_xref="HSSP:1CIM"
FT                   /db_xref="InterPro:IPR018440"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q92051"
FT                   /db_xref="ZFIN:ZDB-GENE-980526-39"
FT                   /protein_id="AAH65611.1"
FT                   /translation="MAHAWGYGPADGPESWAESFPIANGPRQSPIDIVPTQAQHDPSLK
FT                   HLKLKYDPATTKSILNNGHSFQVDFVDDDNSSTLAGGPITGIYRLRQFHFHWGSSDDKG
FT                   SEHTIAGTKFPCELHLVHWNTKYPNFGEAASKPDGLAVVGVFLKIGAANPRLQKVLDAL
FT                   DDIKSKGRQTTFANFDPKTLLPASLDYWTYEGSLTTPPLLESVTWIVLKEPISVSPAQM
FT                   AKFRSLLFSSEGETPCCMVDNYRPPQPLKGRKVRASFK"
XX
SQ   Sequence 1548 BP; 446 A; 322 C; 316 G; 464 T; 0 other;
     gttgttttag catccaggtt gtacaagtag aggaacacag cgaaaaccat ttataatcat        60
     ggctcacgct tggggatatg gaccagctga cgggccagag agttgggcag aaagctttcc       120
     tattgcaaat ggacccaggc agtctcccat tgatatcgta cccacccaag cacagcacga       180
     cccttctctg aagcatctca aattgaagta tgacccagcc accaccaaga gcatccttaa       240
     taatggccat tcattccaag tggattttgt tgatgacgac aacagctcaa ctctggctgg       300
     aggtcccatc acagggatat acaggttgag acagttccat ttccattggg gaagcagtga       360
     tgacaaggga tccgagcaca ctattgctgg aaccaagttc ccttgtgagc ttcaccttgt       420
     tcactggaac acaaagtacc caaactttgg agaagctgcc agtaagcctg atggccttgc       480
     tgtggttgga gtttttctca agatcggcgc tgcaaatcca agacttcaga aagttctaga       540
     tgcccttgat gacatcaaat caaagggcag acagactaca tttgccaact ttgatcctaa       600
     aaccttgctg cccgcctctc tggactactg gacttatgag ggctctctga ccacccctcc       660
     tctgctggag agtgtcacct ggattgtttt gaaggagccg atcagtgtta gtcctgctca       720
     gatggctaaa tttcgcagcc tgctgttctc atctgaagga gaaacacctt gctgcatggt       780
     tgacaactac agacctcctc aacctctcaa gggacgcaaa gttcgcgctt ccttcaagta       840
     aaccccagaa tcgatgccac ttgccttctg attatggtgc ttttgactgg ttgttactga       900
     aacatcacag tatttgttct cgatccaggc ttttgcttac attgcagtac tgataacagg       960
     aaagttgaat ctgatcttct aaaactgtct gcgtttgtca taaacgccca tgttatgatt      1020
     gctaaacatg agaaatagta tttcgagatg ctaaaacagt ggttagtttc ctactatatc      1080
     ctgacgcttt tatgtaaact ggaaaaataa ggagactgct ttatttctag ctcatttttt      1140
     gactgcttca ctttgcattt tataggccat tcttttagcc tctgcagaat tgcactataa      1200
     ttcatgttct acaataggaa aatcgtcaag gttttgtgtg ggtttatggc aatgtgtgac      1260
     tgatgagatg tgttgatgct aatatacctg caggaaagca cttatttaca gcaatatgtt      1320
     gttgttttaa agtgattcct ttttcatcaa gaggaatatc aagggattat atttttaaat      1380
     cgtttatgag aatgttgaat caagacctcc tgccatagat aatattattt agatatttca      1440
     gaataaatat ttaattgagt agtgttgcaa acaaatatga tatgtaaatc agtatctatt      1500
     aagaatttta tctgcaataa atgaatatat tttaaaaaaa aaaaaaaa                   1548
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