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EBI DbfetchID BC065449; SV 1; linear; mRNA; STD; VRT; 1800 BP. XX AC BC065449; XX DT 23-JAN-2004 (Rel. 78, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 11) XX DE Danio rerio zgc:77775, mRNA (cDNA clone MGC:77775 IMAGE:7001130), complete DE cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1800 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1800 RG NIH MGC Project RA ; RT ; RL Submitted (20-JAN-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000003829; Danio_rerio. DR Ensembl-Gn; ENSDARG00000008880; Danio_rerio. DR Ensembl-Gn; ENSDARG00000012881; Danio_rerio. DR Ensembl-Gn; ENSDARG00000015880; Danio_rerio. DR Ensembl-Gn; ENSDARG00000021293; Danio_rerio. DR Ensembl-Gn; ENSDARG00000037038; Danio_rerio. DR Ensembl-Gn; ENSDARG00000058280; Danio_rerio. DR Ensembl-Tr; ENSDART00000003076; Danio_rerio. DR Ensembl-Tr; ENSDART00000020253; Danio_rerio. DR Ensembl-Tr; ENSDART00000021360; Danio_rerio. DR Ensembl-Tr; ENSDART00000022967; Danio_rerio. DR Ensembl-Tr; ENSDART00000029386; Danio_rerio. DR Ensembl-Tr; ENSDART00000047257; Danio_rerio. DR Ensembl-Tr; ENSDART00000053834; Danio_rerio. DR Ensembl-Tr; ENSDART00000101013; Danio_rerio. DR Ensembl-Tr; ENSDART00000115134; Danio_rerio. DR ImaGenes; IMAGp998O1714693Q. DR ImaGenes; IRAKp961K22147Q. DR ImaGenes; IRBOp991C0136D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Len Zon, Harvard CC cDNA Library Preparation: Open Biosystems CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 147 Row: k Column: 22 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 41107620. XX FH Key Location/Qualifiers FH FT source 1..1800 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_ZGC_10" FT /clone="MGC:77775 IMAGE:7001130" FT /tissue_type="Whole, adult zebrafish" FT /note="Vector: pExpress1" FT /db_xref="taxon:7955" FT gene 1..1800 FT /gene="zgc:77775" FT /note="synonym: MGC77775" FT CDS 92..1306 FT /codon_start=1 FT /gene="zgc:77775" FT /product="zgc:77775" FT /db_xref="GOA:Q6P0U0" FT /db_xref="HSSP:1UN7" FT /db_xref="InterPro:IPR003764" FT /db_xref="InterPro:IPR006680" FT /db_xref="InterPro:IPR011059" FT /db_xref="UniProtKB/Swiss-Prot:Q6P0U0" FT /db_xref="ZFIN:ZDB-GENE-040426-1871" FT /protein_id="AAH65449.1" FT /translation="MPSNKSVSDAPITQFVNCRILKNHKLQWEDLWVREGKILNPEKLF FT FDEQGFADHRVDCENKIIAPGFIDVQLNGGYGIDFSQASSDIRGGVALVAKKILEHGVT FT SFCPTLVTSPPHIYHKVIPELRVQDGGPEGAGVLGIHLEGPFISEEKRGAHPPKFLRTF FT QSGGVADLMETYGQLENVAMVTLAPELTNSAAAIHELSSRGITVSVGHSMADLSQAEEA FT VQNGATFITHLFNAMLPFHHRDPGIVGLLTSDRIPPGRTVYYGMIADGIHTHPAALRIA FT HRAHPAGLVLVTDAVTAMGLPPGRHTLGQQQIDIQGLHAYVAGTTTLSGSIATMDMCVR FT HFREASGCTVEAALEAASLHPAQLLGISHRKGTLEFGADADFIVLDDMLTVRETYIAGQ FT QVWRK" XX SQ Sequence 1800 BP; 496 A; 390 C; 438 G; 476 T; 0 other; ggacttccta ctgaacacgg gctgctcgta ccaaataaaa gtatgtgaat taacgtgtgt 60 ttttaatgat agggctggga tttgggcaga catgccgtcg aataagagtg tgtcagatgc 120 cccgatcacg cagtttgtga actgcaggat cctgaaaaac cacaaactgc aatgggaaga 180 cctgtgggtt cgagagggca agattttaaa cccagagaag ctgtttttcg atgaacaggg 240 ttttgcggat cacagagtgg actgcgagaa taaaatcatt gcacctggat tcatagatgt 300 gcaactgaat ggtggatatg gcattgactt ctcacaggcc agcagtgaca tcagaggggg 360 tgtggctctg gtggccaaaa agattctaga acacggtgtc acttccttct gccccaccct 420 cgtcacgtct ccaccacaca tataccataa ggttattcct gagctcagag ttcaggatgg 480 aggacctgaa ggtgcaggag ttttaggtat tcatctggag ggcccgttca tcagtgaaga 540 gaagcgaggc gctcaccctc caaagttctt gcgaaccttt cagtccggtg gtgtggcaga 600 cctgatggag acctacggcc agctggaaaa tgtggcaatg gtgactctgg cacccgaact 660 gaccaatagt gcagctgcaa tccatgagct gtccagcagg ggcataacag tgtcagtggg 720 acactcgatg gctgatctct ctcaggctga ggaggctgtg cagaacggag ccacgttcat 780 tacacactta tttaacgcca tgttgccttt tcatcacaga gacccgggca tcgtgggatt 840 gctgacaagt gatcgtattc ctccaggtcg gacggtttac tacggtatga tcgcagacgg 900 gattcacact caccccgcag cgctgcgcat cgcacacaga gctcatcccg cagggttggt 960 gttggtcact gacgctgtaa cagcgatggg tcttcctcct ggtcgacaca cactcggaca 1020 gcagcagatt gacatccagg ggcttcacgc ttacgtcgca ggcactacta ctttgagtgg 1080 cagcatcgcg accatggaca tgtgtgtgag acacttcaga gaggcatcag gctgtactgt 1140 agaagctgca ttagaggccg catctctgca tccggctcag ctactgggca tcagccacag 1200 gaagggaacg ctggagtttg gtgcagatgc agattttata gtactcgacg acatgctgac 1260 agtcagggaa acctacattg ctggacagca ggtctggagg aagtgacgtc atctgctgga 1320 gtatgttcat ctgggacggt tagagtttta cgctctttgg acttgcatca ccaaaaaaga 1380 catattaatg cagaaaacaa accctattcc ttatcattgg acttaaaata gttgattaat 1440 gtctaaatat aaaagtacta catttatacg cacaatcttg acacttgtgt actgtagctg 1500 aatgcatctt gggggtattt tagccaggtt tatttttata aattttccat gtattttgag 1560 taataactta ttcaaatgtg aaatccacag ataagataat ctcaaggggt ccagttatgt 1620 caataacaat aataacctac atgtttttat gatgtgaacc tgggacactt caactatttg 1680 atttcaacaa tgtctatatc tgttcatttt atgttgtcaa cattttaatt gtatttcttt 1740 ttctcagttt aattaaaact tttcatttcc ggtaaaaaaa aaaaaaaaaa aaaaaaaaaa 1800 // |
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