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EBI DbfetchID BC064888; SV 1; linear; mRNA; STD; VRT; 2119 BP. XX AC BC064888; XX DT 10-JAN-2004 (Rel. 78, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 10) XX DE Xenopus tropicalis arginyl-tRNA synthetase, mRNA (cDNA clone MGC:76310 DE IMAGE:5379914), complete cds. XX KW MGC. XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-2119 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-2119 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-2119 RA Klein S., Gerhard D.S.; RT ; RL Submitted (02-JAN-2004) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998I0311967Q. DR ImaGenes; IRAKp961P21142Q. DR ImaGenes; IRBNp992A043D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Robert M. Grainger CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 142 Row: p Column: 21 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 45361658. XX FH Key Location/Qualifiers FH FT source 1..2119 FT /organism="Xenopus (Silurana) tropicalis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Emb8" FT /clone="MGC:76310 IMAGE:5379914" FT /tissue_type="Embryo, Silurana tropicalis, tadpole (stages FT 40-45)" FT /note="Vector: pCMV-SPORT6.1" FT /db_xref="taxon:8364" FT gene 1..2119 FT /gene="rars" FT /note="synonym: MGC76310" FT CDS 28..2010 FT /codon_start=1 FT /gene="rars" FT /product="arginyl-tRNA synthetase" FT /db_xref="GOA:Q6P1S4" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q6P1S4" FT /protein_id="AAH64888.1" FT /translation="MELPVCFYEERLRQQETEIKSLAAEIERLKNCGFVSETPSLEGLR FT EENAKLKYRLNILRKSLLEEKKKSSKSMININAQIQEIFGTAIGAAYPELQNAPLAVTP FT SQQPKFGDYQCNSAMAITQMLKAMNQKVSPREIADKIVKNIPTNELVEKVDIAGPGFIN FT VHLHKDFTSKQISKLLVNGVQPPVIWERKKVVVDFSSPNIAKEMHVGHLRSTVIGDSIC FT RLFEFVGHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQSFYKESKKRFD FT EDEEFKKRAYQCVVQLQNKTPNFIQAWNLICDVSRKEFQKIYDCLDISIIDRGESFYQD FT RMIGVVKEFEEKGLVQVDEGRKVVFPPGCSVPLTIVKSDGGFTYDTSDLAALKQRLQEE FT KADMIIYVIDSGQAIHMQNVFSAGRMIGWYDPKVTRIEHAGFGVVLGEDKKKFKTRSGD FT TVRLIDLLDEGLKRSMEKLKDKGRDKVLTAEELLAAQTSVAFGCIKYADLSHNRMNDYI FT FSFDKMLDDRGNTAAYLLYAYTRIRSIARLANISDEDLHKAAKETEIILEHEKEWKLSK FT CILRFPEILQKILDDLLLHTLCDYLYELATTFTEFYDNCYCVEKDRQTGQIVKVNMSRL FT LLCDATAAVMAKGFDILGIKPVQKM" XX SQ Sequence 2119 BP; 693 A; 391 C; 493 G; 542 T; 0 other; gtcccggcgt gtgagagttt gcagagaatg gagttgccgg tttgtttcta tgaggagagg 60 ctgcggcagc aggagacaga aatcaaatcc ctcgcagcag agatagaaag gctgaaaaac 120 tgtggatttg taagtgagac accaagctta gagggactta gggaagagaa cgccaagctc 180 aaatatcggc tgaacattct gcgtaagagc cttttggagg aaaagaagaa atcatcaaaa 240 agcatgataa atatcaatgc gcagatccaa gagatctttg gcacagctat aggagctgcc 300 tatcccgaac tgcagaatgc tcctttggca gtcacaccaa gccagcagcc aaaatttggg 360 gattaccagt gcaatagtgc tatggccata actcagatgc taaaagctat gaatcaaaaa 420 gtgagtccca gagaaattgc cgacaaaatt gttaaaaaca ttcccacaaa tgaattggta 480 gaaaaagtgg acatcgctgg tccaggtttt attaatgtgc atctacataa agattttaca 540 tcaaaacaga tctccaaact gcttgtaaat ggggtccagc cccctgtaat ttgggaacgg 600 aaaaaggttg tggtggactt ttcttctcca aacattgcca aagaaatgca tgtaggccac 660 ctgcgctcta cagttattgg tgatagtata tgtcgccttt ttgaatttgt gggccatgat 720 gtactgagac tgaaccactt aggagactgg gggactcagt ttggaatgct aattgctcat 780 ctccaggata aatttccaga ttatttgacc gtctcgccac ccataggaga tctccagtct 840 ttttataagg aatcaaaaaa gaggtttgat gaagatgaag aatttaagaa gcgagcttat 900 caatgtgtgg ttcagctaca gaataaaact cctaatttca tccaggcctg gaacctaatc 960 tgtgatgtct ccagaaaaga gtttcagaaa atttatgact gcctggatat ctccatcata 1020 gaccgtggag aatcattcta ccaagaccga atgatcgggg ttgttaagga gtttgaagaa 1080 aaaggtttag ttcaagttga tgaaggcaga aaggttgtgt ttccaccggg atgctcggta 1140 cctttaacaa ttgtgaaatc tgatggtggg ttcacctatg acacatcaga cttagcagcc 1200 ttaaagcaaa gacttcagga ggaaaaagct gatatgatta tctatgttat tgacagtggg 1260 caggccatcc atatgcagaa tgtgttttct gcaggccgaa tgattggttg gtacgatccc 1320 aaagtaacta gaattgaaca tgctggcttt ggtgtggtcc ttggagaaga caagaagaaa 1380 tttaagacca gatctggtga cacagtgcgc ttaatagatt tgttggatga agggcttaag 1440 cggtcaatgg aaaagcttaa agataaagga agggataagg tcttaactgc tgaggaatta 1500 ctagctgctc aaacatctgt tgcctttggc tgcataaagt atgcagactt gtctcataac 1560 agaatgaatg actacatctt ctcatttgac aagatgttgg atgatcgagg gaatacagct 1620 gcttaccttc tttacgccta caccagaata aggtccatag caaggttggc gaatatcagt 1680 gatgaggact tgcacaaagc tgccaaagaa acagagatca ttttagagca tgaaaaggag 1740 tggaagctaa gcaaatgcat tctaaggttt cctgagatac tgcagaagat cttggatgac 1800 ctcctgctcc acactctgtg tgactacctg tatgaactgg ctaccacctt cactgagttc 1860 tatgataact gttactgtgt ggaaaaggat cggcaaactg gtcagatcgt taaggtgaac 1920 atgagccggc tgttgctttg tgatgccacc gctgctgtta tggccaaagg ttttgatatt 1980 ctgggcatca aacctgtaca gaaaatgtaa ttcagggccc atacaacatg acagaacctt 2040 acttttctaa aactccacaa ataaaaagat ttactgaaaa aaaaaaaaaa aaaaaaaaaa 2100 aaaaaaaaaa aaaaaaaaa 2119 // |
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