EBI Dbfetch

ID   BC062410; SV 1; linear; mRNA; STD; ROD; 1940 BP.
XX
AC   BC062410;
XX
DT   19-NOV-2003 (Rel. 77, Created)
DT   16-JUL-2006 (Rel. 88, Last updated, Version 9)
XX
DE   Rattus norvegicus hyaluronoglucosaminidase 2, mRNA (cDNA clone MGC:72280
DE   IMAGE:5623650), complete cds.
XX
KW   MGC.
XX
OS   Rattus norvegicus (Norway rat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Rattus.
XX
RN   [1]
RP   1-1940
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-1940
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (17-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
XX
DR   ASTD; TRAN00000000186.
DR   Ensembl-Gn; ENSRNOG00000031420; Rattus_norvegicus.
DR   Ensembl-Tr; ENSRNOT00000017461; Rattus_norvegicus.
DR   ImaGenes; IMAGp998D1912451Q.
DR   ImaGenes; IRAKp961P10137Q.
DR   ImaGenes; IRBPp993B1047D.
XX
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Dr. Maarten Bosland, NYU
CC   cDNA Library Preparation: Life Technologies, Inc.
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: National Institutes of Health Intramural
CC   Sequencing Center (NISC),
CC   Gaithersburg, Maryland;
CC   Web site: http://www.nisc.nih.gov/
CC   Contact: nisc_mgc@nhgri.nih.gov
CC   Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
CC   Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
CC   Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
CC   Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
CC   Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
CC   McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
CC   Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
CC   Young,A., Zhang,L.-H. and Green,E.D.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 137 Row: p Column: 10
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 25282396.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1940
FT                   /organism="Rattus norvegicus"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NCI_CGAP_Pr33"
FT                   /clone="MGC:72280 IMAGE:5623650"
FT                   /tissue_type="Prostate, normal lateral, 14 mo. old male
FT                   rat"
FT                   /note="Vector: pCMV-SPORT6.1"
FT                   /db_xref="taxon:10116"
FT   gene            1..1940
FT                   /gene="Hyal2"
FT   CDS             145..1566
FT                   /codon_start=1
FT                   /gene="Hyal2"
FT                   /product="hyaluronoglucosaminidase 2"
FT                   /db_xref="GOA:Q80ZC7"
FT                   /db_xref="HSSP:1FCQ"
FT                   /db_xref="InterPro:IPR018155"
FT                   /db_xref="UniProtKB/TrEMBL:Q80ZC7"
FT                   /protein_id="AAH62410.1"
FT                   /translation="MRAGLGPIITLALVLEVAWASELKPTAPPIFTGRPFVVAWNVPTQ
FT                   ECAPRHKVPLDLRAFDVEATPNEGFFNQNITTFYYDRLGLYPRFDAAGMSVHGGVPQNG
FT                   SLCAHLPMLKEAVERYIQTQEPAGLAVIDWEEWRPVWVRNWQEKDVYRQSSRQLVASRH
FT                   PDWPSDRIVKQAQYEFEFAARQFMLNTLRYVKAVRPQHLWGFYLFPDCYNHDYVQNWDS
FT                   YTGRCPDVEVARNDQLAWLWAESTALFPSVYLDETLASSKHSRNFVSFRVQEALRVAHT
FT                   HHANHALPVYVFTRPTYTRGLTELSQMDLISTIGESAALGSAGVIFWGDSVYASSMENC
FT                   QNLKKYLTQTLVPYIVNVSWATQYCSWTQCHGHGRCVRRNPSASTFLHLSPSSFRLVPG
FT                   RTPSEPQLRPEGELSEDDLSYLQMHFRCHCYLGWGGEQCQWNHKRAAGDASRAWAGAHL
FT                   ASLLGLVAMTLTWTL"
XX
SQ   Sequence 1940 BP; 451 A; 551 C; 537 G; 401 T; 0 other;
     cgagctgggg cagtgcttgg gcgaagggcc ggagcgggct tagctggtac caggatggcg        60
     gcggccctgg cgtgggtcct ggcggcgcct ggtgcgagtt cctgagctgc taccaggcag       120
     gtgacacttc ctgtagcccc cagcatgcgg gcaggactgg gtcccatcat cacactggcc       180
     ctagtgctgg aggtagcatg ggcctcggag cttaagccca cagcgccgcc catcttcacc       240
     ggccgaccct ttgtggtagc atggaatgta cccacacaag aatgtgctcc gcgccacaaa       300
     gtgcccctgg accttagggc cttcgatgtg gaggctacac ctaacgaggg ttttttcaac       360
     cagaatatca ccaccttcta ctatgaccgt ctaggcctgt atccacgttt tgatgcagct       420
     gggatgtctg tgcatggtgg cgtgcctcag aacggtagcc tctgtgcaca cctgcccatg       480
     ctgaaggaag ctgtggaacg ctacattcag acccaggagc ctgcggggct ggcggtcatt       540
     gactgggagg aatggcgacc agtgtgggtt cgaaactggc aggagaaaga tgtgtaccgg       600
     cagtcttcac gccagctggt ggccagtcga caccctgact ggccatcaga ccgaatagtg       660
     aagcaggcgc agtacgaatt cgagttcgct gctcggcagt tcatgttgaa cacactccgt       720
     tacgtcaagg cagtcagacc tcagcacctg tggggcttct acctctttcc tgactgctat       780
     aatcatgatt acgtacagaa ctgggatagc tacacaggcc gctgtcctga cgtggaggtg       840
     gcacgaaatg accagttggc ctggctctgg gctgagagta cagctctctt tccctccgtg       900
     tacctggacg agacgctggc atcctccaaa cacagccgca actttgtcag cttccgtgtt       960
     caggaggccc ttcgtgtggc tcacacccac catgcaaacc atgcactccc cgtgtatgtc      1020
     ttcacgcgtc ccacatatac ccgagggctc acagaactta gccagatgga cctcatctct      1080
     accatcggtg agagcgccgc cctgggctca gctggtgtta tcttctgggg cgactcagtg      1140
     tacgcttcaa gtatggagaa ctgccagaac ctcaagaagt acctaacgca gacgctggtc      1200
     ccctacatag tcaatgtgtc ctgggccacc cagtactgca gttggaccca gtgccatggc      1260
     catgggcgct gtgtgcgccg caatcccagc gccagtacct tcttgcacct cagtcccagc      1320
     agcttccgcc tggtgcctgg ccgcacgccc agtgaacccc agcttcgacc tgagggggag      1380
     ctcagcgaag atgacctcag ctacctgcag atgcactttc gctgccactg ctatctgggc      1440
     tggggtggtg agcagtgcca gtggaaccat aaacgggcag ctggggatgc cagtagagcc      1500
     tgggctggag cccacctcgc cagtctcctg ggtttggtag ctatgactct cacctggacc      1560
     ttataaggga tctctccccg cagatagcag tccagctggc ctctggcaca aggatctcct      1620
     tggcacaagg agcctgttag ggggtaggca aatgagtctg gagttggagt gggcagtacc      1680
     cccaggatgc ctagaagagc atccatacca cctgtcaccc ccctgttcta agggggagag      1740
     aaacatcccc tgagatgccc tcatcttgcc agagaagacg aggatacagc taggccgggg      1800
     aaggcctacc tctactctct gttcctggat agtttataat cttggggtct cttttgtaaa      1860
     ttaaatacaa aacaactgcg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1920
     aaaaaaaaaa aaaaaaaaaa                                                  1940
//