EBI Dbfetch

ID   BC061663; SV 1; linear; mRNA; STD; VRT; 2502 BP.
XX
AC   BC061663;
XX
DT   07-NOV-2003 (Rel. 77, Created)
DT   19-MAR-2009 (Rel. 100, Last updated, Version 4)
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DE   Xenopus laevis 3-hydroxyanthranilate 3,4-dioxygenase, mRNA (cDNA clone
DE   MGC:68644 IMAGE:4032463), complete cds.
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KW   MGC.
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OS   Xenopus laevis (African clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Xenopus.
XX
RN   [1]
RP   1-2502
RX   DOI; 10.1002/dvdy.10174
RX   PUBMED; 12454917.
RA   Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W.,
RA   Richardson P.;
RT   "Genetic and genomic tools for Xenopus research: The NIH Xenopus
RT   initiative";
RL   Dev. Dyn. 225(4):384-391(2002).
XX
RN   [2]
RP   1-2502
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [3]
RC   NIH-MGC Project
RP   1-2502
RA   Klein S., Gerhard D.S.;
RT   ;
RL   Submitted (05-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Xenopus Gene Collection (XGC), National
RL   Institute of Child Health and Human Development, 6100 Executive Boulevard,
RL   Room 4B01, Rockville, MD 20892-7510, USA
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DR   ImaGenes; IMAGp998I089301Q.
DR   ImaGenes; IRAKp961H03128Q.
DR   ImaGenes; IRBHp990G0917D.
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CC   Contact: XGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Dr. Igor Dawid
CC   cDNA Library Preparation: Life Technologies, Inc.
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: National Institutes of Health Intramural
CC   Sequencing Center (NISC),
CC   Gaithersburg, Maryland;
CC   Web site: http://www.nisc.nih.gov/
CC   Contact: nisc_mgc@nhgri.nih.gov
CC   Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
CC   Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
CC   Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
CC   Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
CC   Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
CC   McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
CC   Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
CC   Young,A., Zhang,L.-H. and Green,E.D.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 128 Row: h Column: 3
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 38197524.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2502
FT                   /organism="Xenopus laevis"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NICHD_XGC_Kid1"
FT                   /clone="MGC:68644 IMAGE:4032463"
FT                   /tissue_type="Kidney, adult Xenopus"
FT                   /note="Vector: pCMV-SPORT6"
FT                   /db_xref="taxon:8355"
FT   gene            1..2502
FT                   /gene="MGC68644"
FT                   /gene_synonym="haao"
FT   CDS             71..919
FT                   /codon_start=1
FT                   /gene="MGC68644"
FT                   /gene_synonym="haao"
FT                   /product="MGC68644 protein"
FT                   /db_xref="GOA:Q6P7I0"
FT                   /db_xref="InterPro:IPR016700"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6P7I0"
FT                   /protein_id="AAH61663.1"
FT                   /translation="MAMAINVKKWIEENTEYFLPPVCNKLMHNQQLKVMFVGGPNQRKD
FT                   YHIEEGEELFYQVEGDMCLKIVENGKHKDVHIKQGEMFLLPGRIPHSPQRYADTVGLVF
FT                   ERRRLDTEKDGLRFYVEGSPEVLFEQWFYCEDLGTQLAPIMKEFFSSKQYKSGKPDPDQ
FT                   PKAKMPFCLSTEQVMEPFSFQHWLNKHRLEIIQKKCVSLFGDDHETKAVIYGGGESKQS
FT                   KAQTDVWIWQLEGTSHVTLGNEVLKLGSGDSLLVPEETLFSWTREDGSIALSTSQVPLP
FT                   M"
XX
SQ   Sequence 2502 BP; 792 A; 492 C; 513 G; 705 T; 0 other;
     ctttgcctct gctgcaattt tgtctttatt ttcatacaag ctttttattt cctccgcagc        60
     cttcgatctc atggcgatgg caatcaatgt aaagaaatgg atcgaggaga acacagagta       120
     ttttttgcct ccggtgtgca ataaactcat gcacaaccag cagctgaaag ttatgtttgt       180
     cgggggccca aaccaaagga aggattatca catcgaagag ggagaagagc tgttttacca       240
     agtggaaggg gacatgtgcc tgaaaattgt ggagaatgga aaacacaagg acgtccacat       300
     caagcaaggc gagatgttcc tccttccagg ccgaattcca cattcaccac agagatacgc       360
     agacacggtg gggctcgtgt ttgaaaggag aaggctggat acagagaagg atggcctgag       420
     gttttacgtg gaagggtccc cagaagtatt gtttgaacag tggttttact gtgaagatct       480
     tggaactcag cttgccccga taatgaaaga gtttttcagc tcaaaacaat ataaaagtgg       540
     aaagccagac ccagatcagc caaaagcaaa aatgcccttc tgtctcagta ctgagcaagt       600
     tatggaaccc ttttcattcc agcattggtt gaacaaacat cgtttggaaa taattcagaa       660
     gaaatgtgtg agtttgtttg gagacgatca tgaaacaaag gctgtcatct atggaggtgg       720
     ggaaagcaaa caaagcaaag ctcagactga tgtctggatc tggcaactgg agggaacatc       780
     tcatgtcact ttgggtaatg aagttctgaa gcttggctct ggagatagtc tgcttgtccc       840
     agaagagact ctattctcat ggaccagaga agatggttcc atcgctttat caacaagtca       900
     ggttccattg cccatgtaaa taaccttttc atcaacgtat tccaggagga atcgtcgcca       960
     ttcttattgt tacacagtgg gaccagagtc atgctaaaaa tggggcttta atcaaacgaa      1020
     ttaatgtaaa ctataaatta caattgtcta ttttacatat tgtttgtaat acgcagttct      1080
     gttgcatttg tctcacacct acagaaaacc attgtacaaa ttctgattgc atagattgca      1140
     catccataag ggggttattt ataaagtctt ttttaaaatc ttactataaa atcaaaatgg      1200
     gggtgttaaa agtccgaata aaaagtactc cacttccgac ttgccgagtt caatgggaga      1260
     agtccagaag atatcctgat ctgctctggg ttttgtgcaa tggtccgaag atttcgtggt      1320
     tttcgggcaa taattagtga tgggcgaatt tattcgccag gcgcaaattc gctgcgattt      1380
     gcgtgattcg ccaccagcga ataaatttgc gaaacacccg cgaaaattcg ctggcaaaaa      1440
     ttcggacgtc gaaaaaaacg gacgccggtg tcaaaaaaga gacgcagacg cagtttcgca      1500
     aattttttcc catttcacga attttgcggg aaaatgggtt tttggggaaa attccaaaag      1560
     attcatatga tttgaattgt ttcatgattt tatcaaattt ttacctgcac aggaaatttt      1620
     tgggaaaatg tattgataaa taaggggggg gggagaatga gaaattttcg tattttgata      1680
     aaaaaaatcc cttaagagtc taagggagtt atgtaataaa aggcactaaa tttgcccagg      1740
     aatagtaacc catagcaacc aatcagctgg tagcatttac tggtcacctg ccatccatcc      1800
     tgccccctat gtcacccacc ctgacatcat ccggtccgcc accgacttca gctccctgcc      1860
     ccttgcccat tttccccaaa caaaaaagtg acaaccctaa ctaaagagct gctgaataaa      1920
     aagccgaaaa acaaatcttt cggattttcc accgaaaacc cagtttttgc ctgaaaccca      1980
     cggaatcttt ggattattgc acgaaaccca gcacggaaaa aaaagtcttt gggacttctc      2040
     ccattaactt atatgcaacc tcggcaggtc tgagtaggca aattttacga ttctgacttt      2100
     ttctatcctt ggggtataat aaatacccaa aaattggttt gtttttttcc cactaaaaat      2160
     tttgatttta tactaaaaaa aaacacacat tttttttttt ttggcatttg gagtttagta      2220
     cataaccccc ctaaaagtta ggggtctgat gtgaataatg aaactttgcc tgcagtgctg      2280
     aatcaattaa aaatctgttt tcaggtgata agggaaccat tataaaccaa aatgttgcct      2340
     gtaaaatgta caaaatactc tcattttcca atataaaatc aaagaaataa tttatttgtg      2400
     aagttctgtt ccagttccgg agcaggtcac ctataaacac acaaaaagtt tctccttgtc      2460
     tgttaaaata aagacatttc ttgtttcaaa aaaaaaaaaa aa                         2502
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