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EBI DbfetchID BC060463; SV 1; linear; mRNA; STD; VRT; 1915 BP. XX AC BC060463; XX DT 30-OCT-2003 (Rel. 77, Created) DT 27-MAY-2005 (Rel. 83, Last updated, Version 3) XX DE Xenopus laevis hypothetical protein MGC68641, mRNA (cDNA clone MGC:68641 DE IMAGE:4032413), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-1915 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1915 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1915 RA Klein S., Strausberg R.; RT ; RL Submitted (27-OCT-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp998G069301Q. DR ImaGenes; IRAKp961H02128Q. DR ImaGenes; IRBHp990G1017D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Igor Dawid CC cDNA Library Preparation: Life Technologies, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: National Institutes of Health Intramural CC Sequencing Center (NISC), CC Gaithersburg, Maryland; CC Web site: http://www.nisc.nih.gov/ CC Contact: nisc_mgc@nhgri.nih.gov CC Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., CC Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., CC Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., CC Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., CC Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., CC McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., CC Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., CC Young,A., Zhang,L.-H. and Green,E.D. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 128 Row: h Column: 2 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: Hexamer frequency ORF CC analysis, Similarity but not identity to protein. XX FH Key Location/Qualifiers FH FT source 1..1915 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Kid1" FT /clone="MGC:68641 IMAGE:4032413" FT /tissue_type="Kidney, adult Xenopus" FT /note="Vector: pCMV-SPORT6" FT /db_xref="taxon:8355" FT gene 1..1915 FT /gene="MGC68641" FT CDS 107..1825 FT /codon_start=1 FT /gene="MGC68641" FT /product="MGC68641 protein" FT /db_xref="GOA:Q6PA41" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q6PA41" FT /protein_id="AAH60463.1" FT /translation="MNTLMRRACRRALFPGSFRLPALDPLNGTLMFSSGNACAAPVGCW FT APPSGQDTGIKVYNSLTRKKEPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDTIR FT RILLKVFGIDIVMAMVVTDIDDKIIKRAKELNISPVALARTYEQDFKQDMTALRVLPPT FT VYMRVTESIPQIISFIQQIIANGHAYSTSQGNVYFDVQSIGDQYGKFNDSFCDAASESA FT LQDKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLDIHTGGIDL FT AFPHHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLKNYVTIKEFLKSFSP FT DHLRMFCLRSKYKSAVEYSKESMHDAVNTLHLISSFVDDAKAYLKGQLICQPVQETLLW FT QRLNETKVNVKAAFSDDFDTPRAVDAVLDLIHHGNRQLKAVSKESSSPRSPIVYGAMVS FT YIEQFLEIMGISLGQNQVPAEERHSAMLFNVVEEMVSFRSKVRNYSLATNESATAIGQE FT EKQQYKERRRQLLLEREPLLQACDIARQHLAVYGINVKDRGDTSTWELLDRKEET" FT misc_feature 320..1210 FT /gene="MGC68641" FT /note="tRNA-synt_1e; Region: tRNA synthetases class I (C) FT catalytic domain. This family includes only cysteinyl tRNA FT synthetases" XX SQ Sequence 1915 BP; 578 A; 386 C; 443 G; 508 T; 0 other; ggaggagttg caggtgacac ttgcatggaa cagtgcatgt ggaagctgcc accgggggag 60 gactatattc tgcgcattct gaggcttcct ttttaccggc tgagggatga atacgctgat 120 gcggcgggcc tgccgcaggg cgttattccc tggctcgttc cggttgcctg cactggaccc 180 tttgaacgga actcttatgt ttagcagcgg caacgcgtgc gccgctcctg tcggatgttg 240 ggcgccacca agtggacaag acacgggaat taaagtgtac aacagcctta ctaggaagaa 300 ggagcctctt attctggcag atccgacagt agcgacatgg tatagctgtg gacccacagt 360 ttatgaccat gcacatcttg gacatgcatg ttcttatgtt agatttgaca caattcggag 420 gattctactc aaggtttttg ggattgatat agtcatggcg atggttgtca cagacattga 480 tgataaaata atcaagagag caaaagagct caatatatct ccagtggcct tagcacgtac 540 ttatgaacag gactttaaac aagacatgac tgcattaagg gtccttccac cgacagtata 600 catgagagtt acagaaagta ttccacagat aatatcattt attcaacaga taattgccaa 660 tggacatgca tattctacct cacaaggaaa tgtttatttt gatgttcagt cgattggaga 720 ccaatatggg aaatttaatg attctttctg tgatgcagct agtgagtcag cattgcagga 780 taaaagacat atccgagatt ttgctttgtg gaaaacatcc aaacctgagg agccttactg 840 ggcttctcct tgggggaagg gaagacctgg ctggcacata gagtgttcca caattgcaag 900 ttctgtattt ggcaaacatc tagacattca cactggtggg attgatcttg cttttcctca 960 tcatgaaaat gaaattgctc agtgtgaggc atatcaccag agcacacagt gggggaacta 1020 tttccttcat actgggcatt tacatttgaa aggaaatgaa gaaaaaatgt caaaatcttt 1080 gaaaaactat gtgacaatta aggagttttt aaagtccttt tcccctgacc atttaagaat 1140 gttttgtctt cgttcaaaat ataaatcagc agtggaatac agcaaggagt ccatgcatga 1200 tgcagtaaat accctacacc tgatctcttc atttgtcgat gatgccaaag cctatctgaa 1260 aggtcagctg atttgccagc cagtgcagga aactttactc tggcaaaggc tgaatgaaac 1320 aaaagtaaat gttaaggctg cattttcaga tgactttgac accccccgag cagttgatgc 1380 agttttggac ctcattcacc atggcaacag acagcttaag gctgtttcca aggagtcaag 1440 ctctcccagg agccccatag tttatggtgc catggtctct tacattgaac aatttctgga 1500 gataatggga atttccttgg gccaaaacca ggtccctgca gaagagagac actccgccat 1560 gcttttcaat gtagtcgaag aaatggtcag tttcagaagt aaggtacgca attactccct 1620 ggccacaaat gaatcagcaa ctgcaatagg acaagaagaa aagcagcaat acaaggagag 1680 gaggcggcag ttgttactgg aaagagaacc cctcctacag gcttgtgaca tagcgcgcca 1740 acatctggct gtgtatggca taaatgttaa ggaccgtgga gatacatcaa cgtgggaact 1800 acttgatcgc aaagaagaaa cctaagttca ttcagtaatg tccatttctt ttagatatgt 1860 aaacatattt tgtatatatt tattaaaata agttaaggca aaaaaaaaaa aaaaa 1915 // |
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