EBI Dbfetch

ID   BC060432; SV 1; linear; mRNA; STD; VRT; 2174 BP.
XX
AC   BC060432;
XX
DT   31-OCT-2003 (Rel. 77, Created)
DT   26-JAN-2007 (Rel. 90, Last updated, Version 4)
XX
DE   Xenopus laevis adenosylhomocysteinase, mRNA (cDNA clone MGC:68782
DE   IMAGE:4201976), complete cds.
XX
KW   MGC.
XX
OS   Xenopus laevis (African clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Xenopus.
XX
RN   [1]
RP   1-2174
RX   DOI; 10.1002/dvdy.10174
RX   PUBMED; 12454917.
RA   Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W.,
RA   Richardson P.;
RT   "Genetic and genomic tools for Xenopus research: The NIH Xenopus
RT   initiative";
RL   Dev. Dyn. 225(4):384-391(2002).
XX
RN   [2]
RP   1-2174
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [3]
RC   NIH-MGC Project
RP   1-2174
RA   Klein S., Gerhard D.S.;
RT   ;
RL   Submitted (27-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Xenopus Gene Collection (XGC), National
RL   Institute of Child Health and Human Development, 6100 Executive Boulevard,
RL   Room 4B01, Rockville, MD 20892-7510, USA
XX
DR   ImaGenes; IMAGp998P099547Q.
DR   ImaGenes; IRAKp961N03128Q.
DR   ImaGenes; IRBHp990A0217D.
XX
CC   Contact: XGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Dr. Igor Dawid
CC   cDNA Library Preparation: Life Technologies, Inc.
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: National Institutes of Health Intramural
CC   Sequencing Center (NISC),
CC   Gaithersburg, Maryland;
CC   Web site: http://www.nisc.nih.gov/
CC   Contact: nisc_mgc@nhgri.nih.gov
CC   Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
CC   Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
CC   Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
CC   Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
CC   Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
CC   McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
CC   Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
CC   Young,A., Zhang,L.-H. and Green,E.D.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 128 Row: n Column: 3
CC   This clone was selected for full length sequencing because it
CC   passed the following selection criteria: matched mRNA gi: 38051954.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2174
FT                   /organism="Xenopus laevis"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NICHD_XGC_Emb4"
FT                   /clone="MGC:68782 IMAGE:4201976"
FT                   /tissue_type="Embryo, stage 31/32, Xenopus"
FT                   /note="Vector: pCMV-SPORT6"
FT                   /db_xref="taxon:8355"
FT   gene            1..2174
FT                   /gene="LOC503669"
FT   CDS             28..1329
FT                   /codon_start=1
FT                   /gene="LOC503669"
FT                   /product="LOC503669 protein"
FT                   /db_xref="GOA:P51893"
FT                   /db_xref="HSSP:1LI4"
FT                   /db_xref="InterPro:IPR020082"
FT                   /db_xref="UniProtKB/Swiss-Prot:P51893"
FT                   /protein_id="AAH60432.1"
FT                   /translation="MSDKLSYKVADISLADWGRKAIEIAENEMPGLMKMREMHSESKPL
FT                   KGARIAGCLHMTLQTAVLIETLTALGAEVQWSSCNIFSTQDHAAAAIAKTGVPVYAWKG
FT                   ETDEEYIWCIEQTIYFKDGKPLNMILDDGGDLTNLVHSKYPQLLKGIKGISEETTTGVH
FT                   NLYKMKSSGTLQVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGY
FT                   GDVGKGCAQALRAFGARVIITEIDPINALQAAMEGYEVTTMDEASKEGNIFVTTTGCAD
FT                   IVEGRHFENMKDDSIVCNIGHFDIELDVKWLNENAVKKVNIKPQVDRYLLKNGRHIILL
FT                   AEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTNTDKYPVGVYFLPKKLDEAVAAAH
FT                   LDKLGVKLTKLTDKQAKYLGLDKEGPFKPDHYRY"
XX
SQ   Sequence 2174 BP; 622 A; 476 C; 475 G; 601 T; 0 other;
     caacgtgaga tctccctcct cttcaccatg tctgacaaac tgtcctacaa agtcgctgac        60
     atcagcctgg ccgactgggg cagaaaggcc atagagattg ctgagaatga aatgcctgga       120
     ctgatgaaga tgagggagat gcactctgaa tccaagcctt tgaaaggagc caggattgcg       180
     gggtgcctgc atatgaccct tcagactgct gtccttattg agaccctgac tgcactagga       240
     gctgaggtgc aatggtccag ttgcaacatc ttctctacac aggatcacgc tgctgcagcc       300
     attgctaaaa ctggagtccc agtgtacgcc tggaagggtg agaccgatga agagtacatt       360
     tggtgcattg agcagaccat ttactttaaa gatggcaaac ccctcaacat gatcctggat       420
     gacggtggag acctgaccaa tctggttcac tctaagtatc cccagctact gaaaggcatt       480
     aaaggaatct ctgaagagac caccactggc gttcacaacc tctacaaaat gaagtccagt       540
     ggaacactgc aggtgccagc cattaatgtg aatgactctg ttaccaagag caagtttgat       600
     aacctgtatg gatgcagaga atcgctcatt gatggtatta agcgagccac cgatgtaatg       660
     attgctggca aggtagctgt tgtagctgga tatggtgatg ttggtaaagg atgtgcacaa       720
     gcgctaagag cctttggagc ccgtgtcatc atcactgaaa ttgatccaat caatgcactt       780
     caggctgcta tggaaggata tgaagtgact acaatggatg aagccagcaa agaaggaaac       840
     atctttgtga ccactactgg atgtgcagat attgtagagg gcagacattt tgaaaacatg       900
     aaagatgatt ccattgtctg caacattggg cattttgata tagaactgga tgtgaaatgg       960
     ctgaacgaaa atgctgtcaa aaaagtcaac atcaaaccac aggtggatcg atatctgctg      1020
     aagaacgggc ggcacatcat tctgcttgcc gagggccgtc tggtgaattt ggggtgcgcc      1080
     atgggacacc ccagctttgt catgagcaat tctttcacaa atcaggtgat ggctcagatt      1140
     gagctgtgga ccaacactga caagtatcct gtcggcgtat atttcctgcc aaagaagttg      1200
     gacgaggctg tagctgctgc tcaccttgac aagctgggag tcaagctcac caagctgaca      1260
     gacaaacaag ccaagtatct tgggctggac aaggaaggtc cttttaaacc tgatcactac      1320
     agatactaag gatccaccaa cccaaaacct ggaacataaa acaagagaat tctgcatcca      1380
     aagcaaccat ttcccagaga gtatggtctc tcctcctaaa gcctggaatt tcatggcaaa      1440
     ttcaagtctt attgagttgc taaatctggt atatttggat ctgtatatgg ggttttctca      1500
     ccataatgga aaaaatgtgc ctctttcttc tgtaactaga cttttcttca ctactacacc      1560
     ctgtgaagcc aatgagtaat atgtgcaagc aaaggtcatg gcgttggggt agttacagtc      1620
     catcagcttt attagaacgg ttttcctaag ttggaagctc caaactgata cctatcatcc      1680
     taaagtgtca ctcaacaaga tcagtatgga ttggaagatt gatttgcaat gtgcgggtat      1740
     ctacaggtct ttgcacaact ccagccaaat tgttcatgtt tattggctct ccagcttttt      1800
     gttgattata tattggtttt tttttccccc aaagtggatc cctcaaaagg ctttgtttta      1860
     ccaatcttcc tccatgcttt aacaaacatc tcctagtatt tggtctatcc tacctcggcc      1920
     tgcttgtctt aagagctttt gtatttcctg atgtctcttt ccattagcca ttcctgtagc      1980
     actctgatta ttgcaacaag aaccttaaac tttttttttt tttcattttt ccagtggaaa      2040
     tgtgaacttc agcaactcta ccttatattt aggtccaatc ttttccaacg ttgaacttaa      2100
     atgtttgtct ccagttttca gtgaatccgc aatcttcggt aaccacaata aaaaaaataa      2160
     ataaaaaaaa aaaa                                                        2174
//