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EBI DbfetchID BC055631; SV 1; linear; mRNA; STD; VRT; 1978 BP. XX AC BC055631; XX DT 05-AUG-2003 (Rel. 76, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 12) XX DE Danio rerio 7-dehydrocholesterol reductase, mRNA (cDNA clone MGC:66389 DE IMAGE:5913496), complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1978 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1978 RG NIH MGC Project RA ; RT ; RL Submitted (01-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000015564; Danio_rerio. DR Ensembl-Tr; ENSDART00000008033; Danio_rerio. DR ImaGenes; IMAGp998A1713154Q. DR ImaGenes; IRAKp961N08122Q. DR ImaGenes; IRBOp991E0928D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 122 Row: n Column: 8 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 33416580. XX FH Key Location/Qualifiers FH FT source 1..1978 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="Sugano SJD adult male" FT /clone="MGC:66389 IMAGE:5913496" FT /tissue_type="Whole body, adult male" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..1978 FT /gene="dhcr7" FT CDS 75..1511 FT /codon_start=1 FT /gene="dhcr7" FT /product="7-dehydrocholesterol reductase" FT /db_xref="GOA:Q7SXF1" FT /db_xref="InterPro:IPR018083" FT /db_xref="UniProtKB/Swiss-Prot:Q7SXF1" FT /db_xref="ZFIN:ZDB-GENE-030912-9" FT /protein_id="AAH55631.1" FT /translation="MMASDRVRKRHKGSANGAQTVEKEPSKEPAQWGRAWEVDWFSLSG FT VILLLCFAPFLVSFFIMACDQYQCSISHPLLDLYNGDATLFTIWNRAPSFTWAAAKIYA FT IWVTFQVVLYMCVPDFLHKILPGYVGGVQDGARTPAGLINKYEVNGLQCWLITHVLWVL FT NAQHFHWFSPTIIIDNWIPLLWCTNILGYAVSTFAFIKAYLFPTNPEDCKFTGNMFYNY FT MMGIEFNPRIGKWFDFKLFFNGRPGIVAWTLINLSYAAKQQELYGYVTNSMILVNVLQA FT VYVVDFFWNEAWYLKTIDICHDHFGWYLGWGDCVWLPFLYTLQGLYLVYNPIQLSTPHA FT AGVLILGLVGYYIFRVTNHQKDLFRRTEGNCSIWGKKPTFIECSYQSADGAIHKSKLMT FT SGFWGVARHMNYTGDLMGSLAYCLACGGNHLLPYFYIIYMTILLVHRCIRDEHRCSNKY FT GKDWERYTAAVSYRLLPNIF" XX SQ Sequence 1978 BP; 466 A; 521 C; 450 G; 541 T; 0 other; tcgtttcatc atcacacagt caacaacatc tgggcagcct gcagttgcgc agcatcaccc 60 ccgaaacaac aatcatgatg gcatctgaca gggtgagaaa gcgccataag ggcagtgcca 120 atggtgccca gacagtggag aaggagccat caaaggagcc ggcgcagtgg ggaagagcat 180 gggaggtgga ttggttctct ctttcgggtg tgatcctgct gctctgcttt gcccccttcc 240 ttgtctcttt cttcatcatg gcatgtgatc agtaccagtg ctccataagt caccctctac 300 ttgatctcta caacggtgac gccaccctgt tcaccatctg gaaccgggct ccttccttca 360 catgggctgc tgcaaaaatc tacgccatct gggtcacatt tcaggtggtg ctgtacatgt 420 gtgttccaga ttttctgcat aagatccttc caggctacgt aggaggagtt caggatggtg 480 cccgtacacc tgcaggtctg attaataaat atgaggtcaa cggtcttcag tgctggctca 540 tcactcatgt tttatgggtg cttaacgctc agcacttcca ctggttttcg ccaaccatca 600 tcattgacaa ctggatccct ctgttatggt gcaccaacat cctcggctat gctgtgtcca 660 catttgcttt cattaaagcg tatctgttcc ccaccaaccc agaggactgt aaattcacag 720 gcaacatgtt ctacaactac atgatgggaa ttgagttcaa tcctcgtata ggaaaatggt 780 ttgacttcaa gctttttttt aatggccggc cgggtatcgt ggcatggacc ctcataaact 840 tatcctatgc agctaagcag caggagctgt atggttacgt gacaaactct atgatcctgg 900 tcaacgtttt gcaggccgtc tatgtagtgg actttttctg gaatgaagcc tggtacctga 960 agactattga catctgccat gatcattttg gctggtatct gggctgggga gactgtgtgt 1020 ggctgccttt cctctacaca cttcagggtc tttacctggt ctacaacccc atccagctct 1080 ctacgcccca cgcagcaggg gtcctcatcc tgggtctggt gggctactac atcttccgcg 1140 tgaccaacca ccagaaagac cttttccgtc gcactgaggg caactgcagc atctggggta 1200 agaagcccac cttcatcgag tgctcctacc aatcggccga cggtgcaatt cacaagagca 1260 aactcatgac ctctgggttt tggggtgtgg cgcgtcacat gaactacacg ggcgacttga 1320 tgggctcgct ggcgtactgt ttggcctgtg gaggcaacca cctactgccg tatttctaca 1380 tcatctacat gaccatcctg ctggtgcacc gctgcattcg ggacgagcac cgctgtagca 1440 acaaatacgg caaggactgg gagcgctaca ctgcggcagt ttcctaccgc ttactgccta 1500 acatctttta gatttccatc aattcccaga atgcatttct gtacaggaca caaaggtgaa 1560 ggcccttggc acgcccctta cttctgattt tttccttggc ctttttttat atttcaacta 1620 tagtttctag acacgcccct tactgctgat tggttgcgcc cttggcctgt ttgtgatatt 1680 tcaactatag tttctagaca cgccccttac tgctgattgg ctgcgccctt ggcctgtttg 1740 tgatatttca actatagatt ctagacatgc cacttactgc tgattggctg ctagtgtgtg 1800 tacagcagga caagcaccgc tgtagcaaca aatacagcaa ggactgggag tgatagacta 1860 caactgtttt tacggcttat ctccaccaat tcccagaatg catttctgca caggacacca 1920 acagaaaacg acttcttttt ttaacaaaca aaaatctgaa taaaaaaaaa aaaaaaaa 1978 // |
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