 |
|
EBI DbfetchID BC055521; SV 1; linear; mRNA; STD; VRT; 2455 BP. XX AC BC055521; XX DT 05-AUG-2003 (Rel. 76, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 13) XX DE Danio rerio dynamin 1-like, mRNA (cDNA clone MGC:66163 IMAGE:5600405), DE complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2455 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2455 RG NIH MGC Project RA ; RT ; RL Submitted (01-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000015006; Danio_rerio. DR Ensembl-Tr; ENSDART00000006840; Danio_rerio. DR ImaGenes; IMAGp998L0612390Q. DR ImaGenes; IRAKp961I10122Q. DR ImaGenes; IRBOp991G0410D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 122 Row: i Column: 10 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 33416853. XX FH Key Location/Qualifiers FH FT source 1..2455 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="Sugano SJD adult male" FT /clone="MGC:66163 IMAGE:5600405" FT /tissue_type="Whole body, adult male" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2455 FT /gene="dnm1l" FT /note="synonyms: MGC66163, zgc:66163" FT CDS 84..2159 FT /codon_start=1 FT /gene="dnm1l" FT /product="dynamin 1-like" FT /db_xref="GOA:Q7SXN5" FT /db_xref="InterPro:IPR003130" FT /db_xref="UniProtKB/Swiss-Prot:Q7SXN5" FT /db_xref="ZFIN:ZDB-GENE-040426-1556" FT /protein_id="AAH55521.1" FT /translation="MEALIPVINKLQDVFNTVGADIIQLPQIAVVGTQSSGKSSVLESL FT VGRDLLPRGTGIVTRRPLILQLVHVDPEDRRKTSEENGVDGEEWGKFLHTKNKIYTDFD FT EIRQEIENETERVSGNNKGISDEPIHLKIFSPHVVNLTLVDLPGITKVPVGDQPKDIEL FT QIRELILKYISNPNSIILAVTAANTDMATSEALKVAREVDPDGRRTLAVVTKLDLMDAG FT TDAMDVLMGRVIPVKLGLIGVVNRSQLDINNKKSVADSIRDEHGFLQKKYPSLANRNGT FT KYLARTLNRLLMHHIRDCLPELKTRINVLSAQYQSLLSSYGEPVEDMSATLLQLITKFA FT TEYCNTIEGTAKYIETAELCGGARICYIFHETFGRTLESVDPLGGLTTIDVLTAIRNAT FT GPRPALFVPEVSFELLVKRQVKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPK FT LHDAIVEVVTSLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNNNIEEQRRN FT RMRELPTSVPRDKMAGGAQAEQEGGTGTWRGMLKKGDEGQGEEKTKLQSSIPASPQKGH FT AVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKD FT SLQSELVGQLYKPALLDDLLTESEDMAQRRNEAADMLKALQKASQVIAEIRETHLW" XX SQ Sequence 2455 BP; 683 A; 572 C; 651 G; 549 T; 0 other; aaattggatg actttgtgcc gtgtttagcc gggttgttcg ccttagctca ttcattttga 60 caggggaaga gatcgtcaac gcgatggagg ctcttattcc tgtcattaac aaactccagg 120 atgtttttaa cacagtcggg gcggacatta tccagctgcc tcaaattgcg gtggtgggga 180 cgcagagtag cgggaagagt tcagttttgg agagtttggt tggtagagac ctcctgcccc 240 gcgggacggg catcgtcacc cgcaggcccc tcatcctcca gctggtgcat gtagacccag 300 aggacagaag aaagaccagc gaggagaacg gagtggatgg agaagagtgg gggaagtttc 360 tacacaccaa aaacaagatc tacacagatt ttgatgaaat caggcaagaa attgaaaatg 420 aaacagaaag agtttctggc aataacaagg gcatcagtga tgagcccata cacctaaaaa 480 tcttctctcc acatgttgtc aacctcacgc tggtggatct gcccggcatc acaaaggtcc 540 cagtgggaga ccagcctaaa gacattgagt tgcagatccg tgaactgatc ctaaaataca 600 tcagcaatcc caacagcatc attttagcag tcactgcggc caacacagat atggccactt 660 ctgaagccct gaaagtagcc cgtgaggtgg atccggacgg tcgcagaacg ctggctgtag 720 tgactaaact agatctgatg gatgccggaa ccgacgcaat ggatgtacta atgggcagag 780 tcattcctgt gaaactaggg ctgattggag tggtcaacag gagtcagctg gacatcaata 840 ataagaaaag tgtggcagac tccattcgtg atgaacatgg cttcctgcaa aagaaatacc 900 cttctcttgc aaacagaaac gggactaaat atctggccag aacattgaac aggttattga 960 tgcatcacat tagggactgt ttacctgagc tgaagacccg tatcaacgtt ctgtcagccc 1020 agtatcagtc tctgctcagc agctacggag agccggtgga ggacatgagc gccacactgc 1080 tgcagctcat cacaaagttt gccacagagt actgtaacac tattgaagga acggccaaat 1140 acattgaaac agctgaactg tgtggtggag ccagaatttg ttatattttc catgagacgt 1200 ttggtaggac actggaatca gtcgatcctc ttggcggact tacaactata gatgtgctta 1260 cagctattag gaacgctacg ggtccgcgtc ctgctctatt cgtgcctgag gtgtcgttcg 1320 agctgctggt gaagaggcag gtgaagcgtc tggaggagcc cagtctgcgc tgtgtggagc 1380 tggtgcacga ggagatgcag aggatcattc agcactgcag caactacagc actcaggagt 1440 tgcttaggtt tccaaagctc cacgatgcca tagtagaagt ggtcacatct ctgctccgga 1500 agaggctccc agtcaccaat gagatggttc acaatcttgt ggcaatcgag ttggcttata 1560 tcaacaccaa acacccagac tttgctgatg cttgtggact catgaacaac aacattgagg 1620 agcagagacg taaccgaatg agagagcttc ctacttctgt gcctcgtgat aagatggctg 1680 gaggagctca agcggagcag gaaggaggaa cagggacctg gagaggtatg ttgaagaagg 1740 gagatgaagg ccagggtgag gaaaagacca aactacaaag ctctattcca gccagccctc 1800 agaaggggca cgcggtgaac cttctcgatg tgcctgtgcc ggtcgcccga aagctgtctg 1860 cccgtgaaca gagggactgt gaggtcatcg agaggctcat caagtcttat ttcctcattg 1920 ttcggaaaaa catccaggac agcgtaccaa aggctgtgat gcacttcctg gtgaaccacg 1980 tgaaggacag cttacagagc gagctggtgg gacagcttta taaacctgcc ctgctagatg 2040 acctgctcac cgaatctgag gacatggctc aacgccgcaa cgaagcagct gatatgctca 2100 aggccttgca gaaagccagt caggtgatcg ccgagattcg agagacgcac ttgtggtgaa 2160 cgtcccgccg ctgatgtata gccccttccc ttcacgcgaa ccctgcgctc ggagtcagtc 2220 tcttctgttc ggatctcaca gacagccaac ttgaaaatgc actgtcagtt aatgtctatt 2280 gaatatagtt ttatgtacgc aacggactct tagtgaacta cattgagggc agcacatatc 2340 acagcacacc tgcacaccgt cccgttctga gatcttacat gtacgtgagc tatcatgtgt 2400 tcctgatgta gcctaaatta aaggtagtga tgtaaactga aaaaaaaaaa aaaaa 2455 // |
|