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EBI DbfetchID BC055506; SV 1; linear; mRNA; STD; VRT; 2013 BP. XX AC BC055506; XX DT 05-AUG-2003 (Rel. 76, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 13) XX DE Danio rerio zgc:66135, mRNA (cDNA clone MGC:66135 IMAGE:3815342), complete DE cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2013 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2013 RG NIH MGC Project RA ; RT ; RL Submitted (01-AUG-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000023498; Danio_rerio. DR Ensembl-Tr; ENSDART00000108974; Danio_rerio. DR ImaGenes; IMAGp998B159101Q. DR ImaGenes; IRAKp961D03122Q. DR ImaGenes; IRBOp991H109D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Preparation: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 122 Row: d Column: 3 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 33416562. XX FH Key Location/Qualifiers FH FT source 1..2013 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /strain="AB" FT /mol_type="mRNA" FT /clone_lib="Sugano Kawakami zebrafish DRA" FT /clone="MGC:66135 IMAGE:3815342" FT /tissue_type="Whole body, adult, (one male and one female, FT including unfertilized eggs)" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2013 FT /gene="zgc:66135" FT /note="synonym: MGC66135" FT CDS 233..1501 FT /codon_start=1 FT /gene="zgc:66135" FT /product="zgc:66135" FT /db_xref="GOA:Q7SXP8" FT /db_xref="HSSP:1G95" FT /db_xref="InterPro:IPR005835" FT /db_xref="UniProtKB/Swiss-Prot:Q7SXP8" FT /db_xref="ZFIN:ZDB-GENE-040426-1550" FT /protein_id="AAH55506.1" FT /translation="MLKAIILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACA FT QVPDMKEIMLIGFYQPNDELNRFIYSAQQEFKIPIRYLQEFAALGTGGGIYHFRDQILS FT GGPAAFFLMNADVCSEFPLLEMLQFHRQHGENHCGVLLGTTANRTQSLNYGCIVENHET FT NEVLHFVEKPSTFVSDIINCGIYLFTPDIFAHIGKVFQRNQQEKIQEELTHGRQMPEVV FT RLEQDIFTALAGQKKLFVYKTQHFWSQIKSAGSAIYASRLYLKQYHQTHPERLATNQGG FT TPKITGDVYIHPTANIDPSAVLGPNVSIGKGVTIGGGVRVRESIILHGAVLQDHCCVLN FT SIVGWDSTVGKWARVEGTPSDPNPNDPYAKIDSETLFRDGGLTPSITILGCNVNIPSEV FT IIRNSIVLPHKDLNRSFKNQIIL" XX SQ Sequence 2013 BP; 608 A; 388 C; 428 G; 589 T; 0 other; actcacttcc gcgttactgt actgaatgga ttttatgaaa ctggtctgtt aaggttaaat 60 tgtactagtt tgggctcgct gttgcgattt tcggaaaagt tagaagaagt gttttataga 120 ctaaacaaaa tgtttaacta gttattttat aaacagacgt gataacaaaa actggacgtg 180 aaataatccg cgaattaaat ttcaattcaa gtgactacat cataactgaa agatgttaaa 240 agcgattatc ctaattgggg gtcctcaaaa aggtaccagg ttccgccccc tgtcatttga 300 ggtgcccaaa cctcttttcc ctgtagcagg agttccaatg ctgcaacatc acattgaagc 360 ctgtgcccaa gttcctgata tgaaggagat catgctaata ggcttttatc agcccaacga 420 tgagctgaac cgcttcattt attctgctca gcaggagttt aaaatcccaa tcaggtacct 480 gcaggagttt gctgctctgg gtacaggtgg tgggatctat cactttcgtg accaaatcct 540 gtccgggggc ccggctgctt ttttcctcat gaatgcagat gtatgctcag agttcccctt 600 gctagaaatg ctccagttcc accgtcagca tggtgaaaat cattgtggag tcctacttgg 660 aactacagca aatcgaacac aatctctgaa ctacggctgc attgtggaaa accatgagac 720 aaatgaggtg ctccattttg tagagaaacc cagtactttt gtaagcgaca tcatcaactg 780 tggcatctat ttgttcaccc cagatatttt tgcccatatt gggaaagttt tccagaggaa 840 ccaacaagag aagatccagg aagagctcac tcatggcagg cagatgccag aggtggttcg 900 gctggaacag gacattttta cagccctagc aggacagaaa aaactctttg tctataaaac 960 acagcacttc tggagtcaga taaagtctgc agggtcagca atatatgcta gtcgcttgta 1020 cctcaaacag tatcatcaga ctcatccgga gagactggcc acaaaccaag gtggaacccc 1080 caaaataaca ggagatgttt atatccatcc tactgcaaac attgatcctt ctgctgtgtt 1140 aggtcctaat gtttccattg gcaaaggggt gacaattgga ggaggtgtaa gagtgaggga 1200 gtccatcatt ttacatggag ccgtgttaca ggaccactgt tgtgtgttga acagtattgt 1260 tggctgggac agcacagtgg ggaagtgggc aagagtggaa ggaactccaa gtgaccctaa 1320 tcccaatgac ccgtatgcca agatagacag tgagactctg ttcagggacg gaggtctgac 1380 cccatccatc accatccttg gctgcaatgt gaatattcca tcagaggtca tcattcgaaa 1440 ctctatcgtc ttgcctcata aagatctcaa caggagcttc aaaaaccaga tcattctcta 1500 aaagacactt ttctcttttc ttgggaataa atattgcaca atgggggatg tagaaagtat 1560 atagtattgt ttatagttta tttttatgta atgtttaggt acttggagaa aatgtgtcta 1620 catatggaag cagattgtat tacagtagta tagtgtaaat tatatggttg aacaactggg 1680 gattttcctg ataaatttca ggattggata ttttgtattt aatgactctg ctgatacacc 1740 agccttacac gcactgacac aacattagat ttgagtgtta atggttttat tcttaataac 1800 aaatgacaca tattatacct gtattgcctt ttccacaaaa tgatgagaga ttaggtcatt 1860 tttgtttgtc tttctttaga aaatgacaaa tttgaaggga catagtgttt ttttgggcag 1920 aaacaaaact tttgttgttg ttgattatcg ctttattctg ttacaacagt ttattaaaat 1980 aatcttaaca caaaaaaaaa aaaaaaaaaa aaa 2013 // |
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