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EBI DbfetchID BC055123; SV 1; linear; mRNA; STD; VRT; 1799 BP. XX AC BC055123; XX DT 16-JUL-2003 (Rel. 76, Created) DT 19-MAR-2009 (Rel. 100, Last updated, Version 11) XX DE Danio rerio tryptophan 2,3-dioxygenase b, mRNA (cDNA clone MGC:63488 DE IMAGE:2639151), complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1799 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1799 RG NIH MGC Project RA ; RT ; RL Submitted (14-JUL-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000023176; Danio_rerio. DR Ensembl-Tr; ENSDART00000032844; Danio_rerio. DR ImaGenes; IMAGp998B166585Q. DR ImaGenes; IRAKp961C03118Q. DR ImaGenes; IRBOp991E1224D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Preparation: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 118 Row: c Column: 3 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 32766520. XX FH Key Location/Qualifiers FH FT source 1..1799 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /strain="AB" FT /mol_type="mRNA" FT /clone_lib="Sugano Kawakami zebrafish DRA" FT /clone="MGC:63488 IMAGE:2639151" FT /tissue_type="Whole body, adult, (one male and one female, FT including unfertilized eggs)" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..1799 FT /gene="tdo2b" FT /gene_synonym="fi30d08" FT /gene_synonym="Tdo2" FT /gene_synonym="tdo2l" FT /gene_synonym="wu:fi30d08" FT /gene_synonym="zgc:63488" FT CDS 75..1298 FT /codon_start=1 FT /gene="tdo2b" FT /gene_synonym="fi30d08" FT /gene_synonym="Tdo2" FT /gene_synonym="tdo2l" FT /gene_synonym="wu:fi30d08" FT /gene_synonym="zgc:63488" FT /product="tryptophan 2,3-dioxygenase b" FT /db_xref="GOA:Q7SY53" FT /db_xref="InterPro:IPR004981" FT /db_xref="UniProtKB/Swiss-Prot:Q7SY53" FT /db_xref="ZFIN:ZDB-GENE-030131-6014" FT /protein_id="AAH55123.1" FT /translation="MSGCPFLGGTLQLLSSNPRQAEEEDGSQGGVNKAAKGGIIYGDYL FT QLDKVLNAQVLQSEQKGNKIHDEHLFIVTHQAYELWFKQILWELDSVRDLFIKKHVRDE FT RNMLKVVSRIHRITMIFKLLVDQFAVLETMTALDFFDFREYLSPASGFQSLQFRLLEQK FT IGVADHLRVPYNRRHYRDNFHGEESETLLSSEQEPTLLQLVEQWLERTPGLEKDGFNFW FT GKLQANIEEGLKREKHQVEKMEDTEVKQELLEDLNKQMETFTALFDSKRHEHLLSKGER FT RLSYKALQGALMINFYREEPRFQVPFQLLTALMEIDTLMTKWRYNHVCMVHRMIGSKAG FT TGGSSGYHYLRSTVSDRYKVFVDLFNLATFLVPRSWVPKLNPNIHKFPYTAECYDSSYN FT SCSSEDSD" XX SQ Sequence 1799 BP; 556 A; 341 C; 406 G; 496 T; 0 other; agaacattgt gacaaccttc agtaagcagt cagaggaaaa aatcaattcc tgttgaacat 60 tgcaaggaca aaacatgagt ggatgtccat ttttgggagg aacgcttcaa ttgttgtcca 120 gtaaccccag gcaggcggag gaagaggatg gatcccaagg aggcgtcaac aaagccgcta 180 aaggaggaat catctacgga gactatttac agcttgacaa ggtgctgaat gctcaagttt 240 tgcagagtga acaaaaaggc aacaaaatcc atgatgagca tctcttcatc gttactcacc 300 aagcgtacga gttgtggttt aagcagatat tgtgggagct tgattcagtt cgtgacctgt 360 tcattaaaaa acatgttcgg gatgagagaa acatgctgaa ggtggtgagc agaatccaca 420 ggataaccat gatcttcaag ctgctggtag atcagtttgc tgtactggag actatgactg 480 ctctggactt ctttgatttc agggagtatc tgtctccagc ctcgggcttc cagagtcttc 540 agttccgtct tctggagcaa aagattggtg tagcggatca tttaagagtc ccgtacaatc 600 gcagacacta cagagacaac tttcatggag aggagagcga gacgctgctg agttcagagc 660 aggaacccac tctccttcag ctggtggagc aatggctgga gaggacacct ggacttgaaa 720 aagatggctt taatttctgg gggaaactgc aggctaacat cgaagagggt ctcaagaggg 780 agaagcacca agtggaaaaa atggaagata ctgaggtgaa gcaagagctt ctggaggatc 840 taaacaaaca gatggagacc tttactgccc tgtttgactc taaacgccac gagcatctgt 900 taagcaaagg tgaacggaga ctttcttaca aggctcttca gggagctcta atgatcaatt 960 tctacaggga agagcctcga ttccaggtac ctttccagct cctgactgcg ctgatggaga 1020 tcgatacact catgaccaag tggagatata accacgtgtg tatggtgcac agaatgattg 1080 gcagtaaagc aggaacgggg ggatcttcag gataccatta cttgcgctca actgtcagtg 1140 accgttacaa agtgtttgtg gatttgttca acctcgccac tttcctggtt cctcgttcct 1200 gggtgcccaa actcaaccca aacatccata agttcccgta cactgccgag tgttacgaca 1260 gctcgtacaa ttcatgcagc agcgaggatt cagattagaa acatcagacc tgtttgtttg 1320 agaataatgt taaagaatcc gggattaatg ccagatattg atactcctgt attgatcagc 1380 caaagtttgt gctttttgga ctatttactt gtttgattga agagactgaa agtttttttc 1440 caccttatat aaacgcaaag atttattata aagtaattgt gcacatatta aaaatctaaa 1500 ggagttctgt acatactatt tatattttaa acatatatgt aaaatataag tcttttgtac 1560 tactaagaat atatttttga atgaggcaca tgatgtaggt ttctctggtt gtttgtaaat 1620 atatgataca ctctactggg tatgtacagt atatatccta atataaaatg tcatttagac 1680 tgtacagaca agtgatgata ctatgttcca cattattaaa caaaatcttt ttttgtcttt 1740 actatatgct tcttacaaaa ataaatgcta aactctttcc tgaaaaaaaa aaaaaaaaa 1799 // |
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