 |
|
EBI DbfetchID BC054932; SV 1; linear; mRNA; STD; VRT; 2501 BP. XX AC BC054932; XX DT 16-JUL-2003 (Rel. 76, Created) DT 16-JUL-2006 (Rel. 88, Last updated, Version 9) XX DE Danio rerio zgc:63701, mRNA (cDNA clone MGC:63701 IMAGE:2600214), complete DE cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2501 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2501 RG NIH MGC Project RA ; RT ; RL Submitted (08-JUL-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ImaGenes; IMAGp998L076483Q. DR ImaGenes; IRAKp961A08118Q. DR ImaGenes; IRBOp991F0624D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Preparation: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 118 Row: a Column: 8 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 32766587. XX FH Key Location/Qualifiers FH FT source 1..2501 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /strain="AB" FT /mol_type="mRNA" FT /clone_lib="Sugano Kawakami zebrafish DRA" FT /clone="MGC:63701 IMAGE:2600214" FT /tissue_type="Whole body, adult, (one male and one female, FT including unfertilized eggs)" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2501 FT /gene="zgc:63701" FT /note="synonyms: MGC63701, GYS1" FT CDS 64..2166 FT /codon_start=1 FT /gene="zgc:63701" FT /product="zgc:63701" FT /db_xref="GOA:Q7SYB8" FT /db_xref="InterPro:IPR008631" FT /db_xref="UniProtKB/TrEMBL:Q7SYB8" FT /db_xref="ZFIN:ZDB-GENE-040426-1243" FT /protein_id="AAH54932.1" FT /translation="MPLARSLSVTSLSGLDDWDEEFDREDAVLFEIAWEVANKVGGIYT FT VIQTKARLTCEEWGENYFLVGPYMESNVRTQVELIEPCNAALRRTIDKMNSSGCKVYFG FT RWLIEGSPYVVLLDVGFTAWSLDRWKSELWEKCNIGVPWFDREANDAVLFGFLTAWLLG FT EYAAQCDEPPHIVAHFHEWLAGLGLVLCRQRQLPVSTIFTTHATLLGRYLCAGNVDFYN FT NLAEFNVDKEAGDRQIYHRYCLERAACRCAHVFTTVSQITAIEAEHLLKRKPDIVTPNG FT LNVKKFSAMHEFQNLHAQSKARIQEFVRGHFYGHLDFNLDKTVFLFIAGRYEFSNKGAD FT IFLEALARLNYLLRVNHSEVTVIAFFIMPARTNNFNVETLKGQAVRKQLWDTAQSVKER FT FGKKLYESLLVGQLPDVSKMLDKEDFTMMKRAIFATQRQCQPPVCTHNMLEDSSDPILN FT CIRRIGLFNSAQDRVKVIFHPEFLSSTSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPA FT ECTVMGIPSISTNLSGFGCFMEEHIADPSAYGIYILDRRYRSVDESCNQLTSFLFQFCQ FT QSRRQRIIQRNRTERLSDLLDWRYLGRYYVSARHLALAKAYPDTYIYEPQEPSSAAGFR FT YPRPASVPPSPAHSLHSSPHHSEAEDEEEPYDEDLEAEKDRVNIRQPYNLPNRNKNQTV FT GLPEKN" XX SQ Sequence 2501 BP; 658 A; 624 C; 618 G; 601 T; 0 other; gtgattgatt ccagcagatg tgaggcttgc gccgctgagc gaggaaaaga cgctaccgca 60 ggcatgccac tggcgcgcag tttatcggtc acctccttgt ctggcctaga tgactgggat 120 gaagagtttg accgggagga tgcagtcctg tttgagattg catgggaggt cgctaataaa 180 gttggtggca tttacacggt gatccagacc aaggcgcgtc tgacctgcga ggaatggggc 240 gagaactact ttctggtggg cccgtacatg gagtccaatg tcaggacgca agtggagctg 300 atcgaaccct gcaatgcggc actcaggaga accattgata aaatgaacag cagcggctgc 360 aaggtttatt ttggtcgatg gcttattgaa ggctcaccat atgtggttct gctggacgtg 420 ggcttcacgg cctggtctct ggaccgctgg aaaagtgaat tgtgggagaa atgtaatatt 480 ggtgtgcctt ggtttgatag agaggcaaac gacgctgttc tctttggctt cctcacagct 540 tggcttctgg gagagtatgc agctcagtgt gacgaacctc ctcatattgt ggcacatttt 600 cacgagtggc tggcaggttt gggtctcgtc ttatgcaggc agcgacaact acctgtatca 660 actattttca ccacacacgc tactctcctc ggccgatacc tgtgtgctgg aaacgtcgac 720 ttctacaaca acctggcaga gttcaatgtg gataaggaag caggggaccg gcagatctat 780 catcgctact gtctggagcg agcagcttgc cgatgtgcac acgtcttcac cacagtctct 840 cagatcaccg ccattgaggc tgagcacctg ctaaagagaa aaccagatat tgtgacacca 900 aatggcctaa atgtgaagaa gttctcagcc atgcatgagt tccagaacct ccatgctcag 960 agtaaagcac gcatccagga gttcgtcaga ggccatttct atgggcattt agattttaac 1020 cttgacaaga cggtgtttct tttcattgct ggacgctatg agttctcgaa taaaggagcg 1080 gatatctttc ttgaagcttt ggccagactt aattacctac tgagggtgaa tcacagcgag 1140 gtgaccgtca tagcattttt cattatgccg gctcgcacca acaacttcaa tgtggagacc 1200 ctgaagggcc aagccgtacg gaaacagctc tgggacactg cacagagtgt gaaagagcgc 1260 tttgggaaga aactctatga atcgctttta gtagggcagt tgcctgatgt gtccaagatg 1320 ttggataagg aggactttac catgatgaag cgtgccatct ttgccaccca gcggcaatgc 1380 cagccccccg tctgcacaca caacatgctg gaggatagca gcgaccccat cctcaactgc 1440 atccgccgca tcggcctctt caactcagct caggacagag tcaaagtgat cttccatcca 1500 gagtttctct cctcaacttc tcctctcttg ccgatggact atgaggagtt tgtgcgaggc 1560 tgccaccttg gagtatttcc ctcttactat gaaccctggg gatacacacc agccgagtgt 1620 acggtgatgg gcatcccgtc aatctccact aacctgtctg ggtttggctg ttttatggag 1680 gagcacattg cagacccatc agcttatggt atctatattc tggaccggcg gtatcgctca 1740 gtggatgagt cctgtaatca gctgacatcg ttcttgtttc agttctgtca gcagagtcgc 1800 aggcaaagga tcattcaaag gaaccgaaca gagcgcctca gtgacctgct ggactggaga 1860 tatctgggcc ggtattacgt ttctgcccgt catttggctt tagcaaaggc ttacccggac 1920 acatacatct atgaacctca agaaccctct tcggccgcag gcttccgtta tccgcgtccc 1980 gcctcagtgc ctccttcccc tgcccactcg cttcactcgt ctcctcatca cagcgaggcc 2040 gaggatgagg aggaaccata cgatgaagat ctggaggctg agaaagatcg agtcaacatc 2100 cgccagccat acaacttacc caacaggaat aagaatcaaa cagttggtct tcctgagaag 2160 aattaaaaca cacacacaga cacacacaaa cagacagaca gacacacact ctgcagctta 2220 tactgtgagg cacttacaca cacacacaca cacacagagc agcttatact gtgaggcact 2280 tacacacaac acacacacac acacacacac actcccttta aagtgaacgt aacgcctgca 2340 aacagtatgt ctgcatgttg gtttattgaa gagaaataaa tatatttaag tatgcggtga 2400 gccgtcgtat gttaaattga ggctttttgt gggaagattt ctccggtgtc tttcacatga 2460 ggcctagtaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a 2501 // |
|