 |
|
EBI DbfetchID BC054256; SV 1; linear; mRNA; STD; VRT; 1821 BP. XX AC BC054256; XX DT 10-JUL-2003 (Rel. 76, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Xenopus laevis phenylalanine-tRNA synthetase-like, mRNA (cDNA clone DE MGC:64470 IMAGE:6881163), complete cds. XX KW MGC. XX OS Xenopus laevis (African clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Xenopus. XX RN [1] RP 1-1821 RX DOI; 10.1002/dvdy.10174 RX PUBMED; 12454917. RA Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W., RA Richardson P.; RT "Genetic and genomic tools for Xenopus research: The NIH Xenopus RT initiative"; RL Dev. Dyn. 225(4):384-391(2002). XX RN [2] RP 1-1821 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [3] RC NIH-MGC Project RP 1-1821 RA Klein S., Strausberg R.; RT ; RL Submitted (30-JUN-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Xenopus Gene Collection (XGC), National RL Institute of Child Health and Human Development, 6100 Executive Boulevard, RL Room 4B01, Rockville, MD 20892-7510, USA XX DR ImaGenes; IMAGp958M023125Q. DR ImaGenes; IRALp962O2049Q. DR ImaGenes; IRBGp989B073D. XX CC Contact: XGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Drs. Donald Brown and Liquan Cai CC cDNA Library Preparation: CLONTECH Laboratories, Inc. CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, CC Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, CC Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo CC Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven CC Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline CC Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, CC Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, CC George Yang, Scott Zuyderduyn, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAL Plate: 49 Row: o Column: 20. XX FH Key Location/Qualifiers FH FT source 1..1821 FT /organism="Xenopus laevis" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NICHD_XGC_Tad1" FT /clone="MGC:64470 IMAGE:6881163" FT /tissue_type="Whole, tadpole, metamorphosis, stage 53" FT /note="Vector: pDNR-LIB" FT /db_xref="taxon:8355" FT gene 1..1821 FT /gene="farsl-prov" FT /note="synonym: MGC64470" FT CDS 47..1546 FT /codon_start=1 FT /product="farsl-prov protein" FT /db_xref="GOA:Q7SYV0" FT /db_xref="HSSP:1JJC" FT /db_xref="InterPro:IPR018157" FT /db_xref="UniProtKB/Swiss-Prot:Q7SYV0" FT /protein_id="AAH54256.1" FT /translation="MADNLLSEQLLQRLQDGDNKGVDTLELAAVLSVDHQQVVGAVKSL FT QCLGEIIEAEQRSSKKWELSSEGEEIAQVGSHEARVFQSLPKEGLLQAELMKLPFAKVG FT FSKAMSNKWIRLDKAAAGGPCVYRVVETIEDTVKEKLQLILKGRADDVNEKDKNELKKR FT KLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIASGSWREKQFKGYNFNALGVMPEC FT GHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTFFLQ FT DPALATEFPMEYLERVKKVHSEGGYGSQGYKYDWSIHEAQKNILRTHTTAVSARMLYKL FT AHQKEFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADRGLTLGNLMGVLKEFFHKL FT GITKLRFKPAYNPYTEPSMEVFSYHEGLKKWVEVGNSGLFRPELLLPMGLPGDVNVLGW FT GLSLERPTMIRYGIKNIRELVGHKVNLQMVYDSPICRLDAC" FT misc_feature 725..1474 FT /note="tRNA-synt_2d; Region: tRNA synthetases class II core FT domain (F). Other tRNA synthetase sub-families are too FT dissimilar to be included. This family includes only FT phenylalanyl-tRNA synthetases. This is the core catalytic FT domain" XX SQ Sequence 1821 BP; 528 A; 389 C; 497 G; 407 T; 0 other; gacttccggg tgattagtgc gcaggcgcgg tgagtaagcc ggcagcatgg cagataactt 60 attgtcggag cagttgttac agagactaca agatggagat aacaagggag tggataccct 120 ggaactggcg gccgtgctca gtgtagatca tcagcaggta gtgggggcag tgaagagcct 180 gcagtgtctg ggagagataa ttgaggcaga acagcgctcc agcaagaaat gggagctcag 240 ctcggaaggg gaagagattg cccaagtggg aagccatgag gcccgggtct tccagagctt 300 gcccaaagaa ggcttgctgc aagccgaact aatgaaactg ccgtttgcaa aagttggctt 360 cagtaaagcc atgtccaaca aatggatccg actggataaa gcagcagcag gagggccctg 420 cgtctacaga gtggtagaga ccatagagga tacggtgaag gagaagctcc agctcatcct 480 caagggaagg gccgatgatg tgaacgagaa ggacaagaac gagctgaaga aaaggaaact 540 tgtcaatgaa gtgacggtta aatcctactg ggtgacaaag ggatccggct tcagcacaag 600 catcaccaag caagagactg atctgacccc agaaatgatt gccagtggat catggaggga 660 gaagcagttc aagggctata acttcaatgc tctgggtgtg atgccagagt gcggccatct 720 gcacccactg ctgaaggtgc gcacccagtt ccgacagatc tttctggaaa tgggattcac 780 agagatgccc accaataact tcatagaaag ctctttctgg aatttcgatg ctcttttcca 840 gccgcagcag caccctgccc gagatcagca cgacaccttc ttcctgcagg atccagcctt 900 agccacagag tttcctatgg aatatctaga aagagttaag aaggttcatt ctgaaggagg 960 atatggttcc caagggtaca aatatgactg gagtatccac gaggcacaaa agaacattct 1020 gaggacacac actacagctg ttagtgctcg gatgctgtac aaactggcac atcagaaaga 1080 gttcacccct gtgaagtatt tctccattga ccgggtgttc aggaacgaga cgctcgatgc 1140 aacgcacttg gctgagttcc accagattga gggggtggtg gcagatcggg gtttaactct 1200 gggaaatctc atgggagttc taaaggaatt ctttcacaag ctgggaatca ctaaactgcg 1260 cttcaagcca gcgtacaacc cttacacaga gccaagtatg gaagtgttca gttaccatga 1320 agggttaaag aaatgggtgg aagttgggaa ttctggactt tttaggccgg agctgctgct 1380 gccgatgggt ctgccgggag acgtcaacgt attgggttgg ggcctgtcgc tggaaaggcc 1440 aacgatgatc agatacggga taaaaaacat ccgtgagctg gtgggacaca aagtcaactt 1500 gcagatggtt tacgacagcc ctatctgtcg cctggatgct tgttgatgat gattatgaag 1560 aacgtttgca gtacaagacc ttcttgtcca ctcggggaac acacggggct ttctgatagg 1620 atacaactcc attgtttatt tatacttgta catgagtaaa agcagtactt tttctatata 1680 gtctgacttt atacaaactc tgagcctctt ttctaagccc tgtatcagtt tgatggttgg 1740 ccagtgtgct aggatgggtt acataaccac ccagtaaatc ttattctgct ccaaaaaaaa 1800 aaaaaaaaaa aaaaaaaaaa a 1821 // |
|