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EBI DbfetchID BC050483; SV 1; linear; mRNA; STD; VRT; 2285 BP. XX AC BC050483; XX DT 23-APR-2003 (Rel. 75, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 8) XX DE Danio rerio ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2, DE mRNA (cDNA clone MGC:55237 IMAGE:5413888), complete cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-2285 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2285 RG NIH MGC Project RA ; RT ; RL Submitted (08-APR-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000018788; Danio_rerio. DR Ensembl-Gn; ENSDARG00000024398; Danio_rerio. DR Ensembl-Gn; ENSDARG00000039534; Danio_rerio. DR Ensembl-Gn; ENSDARG00000041515; Danio_rerio. DR Ensembl-Gn; ENSDARG00000075490; Danio_rerio. DR Ensembl-Tr; ENSDART00000013082; Danio_rerio. DR Ensembl-Tr; ENSDART00000036989; Danio_rerio. DR Ensembl-Tr; ENSDART00000057761; Danio_rerio. DR Ensembl-Tr; ENSDART00000060865; Danio_rerio. DR Ensembl-Tr; ENSDART00000111777; Danio_rerio. DR ImaGenes; IMAGp998P1712055Q. DR ImaGenes; IRAKp961J24103Q. DR ImaGenes; IRBOp991F0720D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 103 Row: j Column: 24 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 30046831. XX FH Key Location/Qualifiers FH FT source 1..2285 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="Sugano SJD adult male" FT /clone="MGC:55237 IMAGE:5413888" FT /tissue_type="Whole body, adult male" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..2285 FT /gene="st8sia2" FT /note="synonyms: cb394, siat8" FT CDS 570..1715 FT /codon_start=1 FT /gene="st8sia2" FT /product="st8sia2 protein" FT /db_xref="GOA:Q7ZU51" FT /db_xref="InterPro:IPR001675" FT /db_xref="InterPro:IPR012163" FT /db_xref="UniProtKB/TrEMBL:Q7ZU51" FT /db_xref="ZFIN:ZDB-GENE-020919-4" FT /protein_id="AAH50483.1" FT /translation="MSFEFRILMFGIGTALVIFVIIADISEVEEEIANIEDSRKFHLKS FT VALQSNRSSDLNAAPTSLVTYRKSKVSSLASPSDIKRKTSNSSSSEWTFNRTLSNLIRK FT NILKFLDAERDISILKSTFKPGDVIHYIFDRQSTTNISENLYHLLPTVSPMKNQHYRKC FT AIVGNSGILLNSSCGREIDSHDFVIRCNLAPVEEYAADVGLRTSLVTMNPSVVQRAFQD FT LNSEEWVQRFVLRLQSLSGSVLWIPAFMAKGGEERVEWAIRLILLHTVNVRTAFPSLRL FT LHAVRGYWLTNHVQIKRPTTGLLMYTMATRFCDEIHLYGFWPFAHDPDGKPVKYHYYDT FT LTYHYTSSASPHTMPLEFRTLSALHRQGALRLHTGPCKPPT" XX SQ Sequence 2285 BP; 667 A; 500 C; 489 G; 629 T; 0 other; atcgctcgca cctggatttg ggattacatg tttgaagaaa aataatgtta ggtttcattt 60 caaacattat gcttcagtgt taaaacaata gaaagtcctc aaccgtaaaa aaccaaacgt 120 gtgcgtcttt gtcaaacagc aacaaagaga ccaaggcgga gagaggatag cccacatctt 180 caatttcaaa cccacgcctt gtgtctgtgt ataccaataa cgcagtttgc ttttcatata 240 tgagtttatg caccttgcag gcaaagtttc aagggaactg cctggcttgc aatctatgta 300 gtagcggcag gaggagtaga agagaagaaa ggacgtgcac gtttgtctca cctctctact 360 actttggtga aggtggaaga agcggacaga cgcgataata atgcagacaa ctgttcgtta 420 acctgcacgg acatggtcca gctttgtcga ggagccggag gagcattaca tgtgttgccc 480 tgcgttagga accagcgtga aagaggagaa cacatttcta ttacgcttta tagttcaacg 540 catttgtaga atcgcgcatc ggtcaagtca tgtcttttga attccgaata ctgatgtttg 600 gaatcgggac agcgctggtt atatttgtga ttatagctga tatatcggaa gtggaggaag 660 aaatcgcgaa cattgaggat tcacggaaat tccacttaaa aagtgtcgcc cttcagtcca 720 acagaagttc agatctgaat gctgccccta cttctctagt cacatataga aagagcaaag 780 tctcctctct agcttcaccg tctgacataa agcgcaaaac cagcaattca tcctcatctg 840 aatggacttt caacagaacc ttgtctaacc tcatcaggaa aaacattttg aaattcctgg 900 atgctgagag ggacatctca attctgaaga gcacctttaa acctggtgat gtaattcatt 960 atatatttga ccgtcagagc accacaaaca tctcagagaa tctgtaccac cttttaccaa 1020 ctgtgtcgcc catgaagaat cagcattaca gaaagtgtgc catcgtaggg aactctggca 1080 tactactgaa cagcagctgc ggcagagaga ttgactcgca cgactttgtt attagatgta 1140 acttggctcc ggtggaggag tatgctgctg atgtgggcct gcgcaccagc ctggtgacta 1200 tgaacccctc agtggtgcag cgtgcctttc aggacctgaa cagcgaggag tgggtgcagc 1260 gtttcgtcct gcggctgcaa agccttagtg ggagtgtgtt gtggattcct gccttcatgg 1320 ctaaaggagg agaggagcga gtggagtggg ccattcgtct cattctcctg catacggtga 1380 acgtccgcac cgccttcccc tctctgcgtc tgctccatgc tgtcagaggt tactggctga 1440 ccaaccatgt ccagatcaaa cgtcccacca ctggactgct gatgtacacc atggctactc 1500 gcttttgtga tgagatccac ctgtatggct tctggccctt cgctcacgac cctgacggca 1560 aaccagtcaa gtatcactac tatgatacac taacttacca ctacacatct agtgccagtc 1620 cacacacaat gcctctggag tttaggacct taagtgctct tcacagacag ggggcgctgc 1680 ggctgcacac gggaccatgc aaacctccta catgaattct ttaaacactg gaccttacac 1740 acacacaaag gaaggaaatg ctgtgaaaaa gtctggaaca actgaatatt tcaggtaaat 1800 ctttgaccat aagtgagaac gcaatatatg aagaggggat gttttttcca aagtgttcaa 1860 ttttaaaaag gtttttaatc ccccatgctg tttgataaga ggcccctttc tggtgttagt 1920 tttttttcat atcatttgtt ttttacatca ttcattaagt gtcttagttt attaaatgcc 1980 aaatatggcc acaagatgga agcaaatcgt agaggagaaa atacagggtt tctgcaggtt 2040 tcataaaaaa gactttagga ctaattcaga aacatgatga atgtcatttc attttttttt 2100 tttttcaaag acctaaatca caaatattga ttttgttttc ttgtcatact gttactgtaa 2160 actttattgt caccttttag gagaattttt tttctgcagc atactagatt tacaacacat 2220 atatcacacc acacacttaa gacaaacatt aaacaacatt aatagtacaa aaaaaaaaaa 2280 aaaaa 2285 // |
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