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EBI DbfetchID BC049077; SV 1; linear; mRNA; STD; MUS; 2855 BP. XX AC BC049077; XX DT 22-MAR-2003 (Rel. 75, Created) DT 24-SEP-2008 (Rel. 97, Last updated, Version 6) XX DE Mus musculus eukaryotic translation initiation factor 4E member 2, mRNA DE (cDNA clone MGC:61339 IMAGE:5708556), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus. XX RN [1] RP 1-2855 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-2855 RG NIH MGC Project RA ; RT ; RL Submitted (19-MAR-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR ASTD; TRAN00000154339. DR ASTD; TRAN00000154340. DR Ensembl-Gn; ENSMUSG00000026254; Mus_musculus. DR Ensembl-Tr; ENSMUST00000113230; Mus_musculus. DR ImaGenes; IMAGp998F1312672Q. DR ImaGenes; IRAVp968C12125D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Jim Lin, University of Iowa CC cDNA Library Preparation: M. Bento Soares, University of Iowa CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: University of Iowa, Dr. M. Bento Soares and Dr. CC Thomas L. Casavant. CC Web site: http://genome.uiowa.edu CC Contact: bento-soares@uiowa.edu; tom-casavant@uiowa.edu CC Bonaldo,M.F., Akabogu,I., Bair,T., Bair,J., Crouch,K., Davis,A., CC Fishler,K., Keppel,C., Kucaba,T., Lebeck,M., Melo,A., Schaefer,K., CC Scheetz,T., Smith,C., Snir,E., Tack,D., Trout,K., Walters,J., CC Casavant,T., Soares,M.B. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: Plate: Row: Column: 0 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 24475675. CC Differences found between this sequence and the mouse C57BL/6J CC genome (build 33) are described in misc_difference features below. XX FH Key Location/Qualifiers FH FT source 1..2855 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /strain="C57BL/6" FT /mol_type="mRNA" FT /clone_lib="NIH_BMAP_EW0" FT /clone="MGC:61339 IMAGE:5708556" FT /tissue_type="Brain, mouse 15.5 dpc" FT /note="Vector: pYX-ASC" FT /db_xref="taxon:10090" FT gene 1..2855 FT /gene="Eif4e2" FT CDS 55..828 FT /codon_start=1 FT /gene="Eif4e2" FT /product="Eif4e2 protein" FT /db_xref="GOA:Q80ZJ3" FT /db_xref="HSSP:1IPC" FT /db_xref="InterPro:IPR019770" FT /db_xref="MGI:1914440" FT /db_xref="UniProtKB/TrEMBL:Q80ZJ3" FT /protein_id="AAH49077.1" FT /translation="MNNKFDALKDDDSGDHDQNEENSTQKDGEKEKTDRDKSQSSGKRK FT AVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWKFYSHMVRP FT GDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVG FT EEICGAVVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIA FT PQGTMSSKLCLMVNPLKVTRPHASTFPLGSVHQQI" FT misc_difference 2832..2855 FT /gene="Eif4e2" FT /note="polyA tail: 24 bases do not align to the mouse FT genome." XX SQ Sequence 2855 BP; 764 A; 677 C; 679 G; 735 T; 0 other; cccggtagag cggaagtcac tccgtgaggc agtggcgaca gcggcggcaa gaggatgaac 60 aacaagttcg acgccttaaa agatgatgac agtggagacc atgatcagaa tgaagaaaac 120 agcacacaga aagatggtga gaaggaaaaa acagaccgag acaagagcca gagcagtggc 180 aagaggaagg ctgttgtccc tggaccagca gagcatcccc tgcagtacaa ctacaccttt 240 tggtactcga ggagaacccc tggccgtccc accagctcgc agagctatga gcagaacatc 300 aagcagattg gcacctttgc ctctgtggag cagttctgga agttttacag ccacatggta 360 cgtcctgggg acctgacagg ccacagtgac tttcatctct tcaaagaagg gattaaacct 420 atgtgggagg atgatgcaaa taaaaatggg ggcaagtgga tcattcgact ccggaagggc 480 ttagcttccc gctgctggga gaatctcatc ctggctatgc tcggggagca attcatggtt 540 ggggaggaga tctgcggggc tgtggtctct gtccgctttc aggaggacat tatttctata 600 tggaataaga ctgccagcga ccaagcaact acagcccgaa tccgggatac tcttcggcgc 660 gtgcttaacc tacctcccaa caccattatg gaatacaaaa ctcacaccga cagcattgca 720 cctcagggaa ccatgagttc caaactatgt ctcatggtta accccttaaa ggtcaccaga 780 cctcatgctt ctacgttccc gcttggctcc gtgcaccaac agatctgaga tatcttgaga 840 tgctaacatg tcatgagagt aaatatgtat catatcttct tgttcagttc agatacttcc 900 cttttttaag ccatctgcca atgttttatg gccagagggc agttccgtag gcctctgtat 960 gggttaggtg agaggtacgc ctcttgtttg ctgtcagcta cagggaaaca gtcaacagac 1020 aggtgaattt cagggcttca taagagacca ggtcaacatg acagagatgg gccccaaagc 1080 agggaaggcg gggccagctc cagcatctgc ctgcctgagt atttgtactt catcagggga 1140 gtgtctggcc catgtctgtc tctagcagag aaatttggag aagtttagct gaaattgaag 1200 cagtattttt ctcagagaga gcctcttcct agaccgcaca ctccatatgc ctctgtagtc 1260 gctgcttgag aagcccgcct acactaggaa ggaagtaaag gttttccaga ccaggagacc 1320 tgccgccctc agatgagcta gaagaggtga cactgaggag caggagcagg tgaatgcatg 1380 gctgagtgct ctctgggctg cagtgatcta gggtgaccag ctgcagggtt cctgaaagtg 1440 gatggtgttt ccaaccccct gagtctcttt gtagttcacc gctgtgtatg ccaagctagc 1500 tggtccaaga gcttgcagag cttgttctgt gtctgcctcc cttatggcga ccacagactt 1560 gtaccacccc gctgggcttt ttacatgttc tgggaattta gaccaaagtc tttatgctta 1620 tacagcaagc actggcccac taagctcaat tttgttttat tgagacagcg ttcatgtggc 1680 acaggcttga gctcattgtg tgattaagat aaccctgaac ctctgattct gatcttgcct 1740 ccacctcctg aggggtggga tcgtacacag agctcccgct ccccctccct tctttatagt 1800 ctgattttgt tgtaaattag gttttgtcca ggtgtagtgc tttataccaa tactctcaac 1860 aatgagaaag ctgaggcagg aggattgcta agagtctgag accagcctga gctacacggt 1920 gagttcaggg cctgcctgag ttatgttgaa atcttaggtg tcctcccctg cctccagccc 1980 tgcagcaagt ctttacaata gaaacttaaa atgacttcct tagcagacac tacattcttc 2040 caggatactg ttgacttgtt tggagaagtc atagtcctta ataattacca cagtatattt 2100 tctctctctg tggccctcct gggctttatg cccttgctgc tttaggtgct cctgaagcac 2160 gggcttagga gtctgtgagg aacattctaa tttataccca aaagacacac acacacacac 2220 accccacatt ggtgggggtt acctcaccca gcttgaaagc aagcccctcc tcatatttca 2280 cctctgttgt ttggggtttg cttttggtga catggtctaa gatgtaggca ccttctgcac 2340 ggacacctta gcttcttgtc cctttcttcg aatggattcc cctctaccaa tcgatcatgt 2400 tctgtagaga aatttgatag aaaaactgct atttaaataa ttctagccag acagggtggc 2460 atacacctat agtctcaata tggcagaggc aggagtatta gtgaagttca aagctagtgt 2520 gggctacatt gtatgacact tgtccacacc cctgtaaaag agtgaggaag atgggagctc 2580 atacatatag tcctagcacg tgggaggtgg aatcccaagg attaggaggc cattgtcctt 2640 acagagcaag ctcaaaacta acttgtgctg catgagaccc tgcctcaaca caaaaaataa 2700 aaactcctta catgcataca tcttaaactt caaatatttt tcccaagtta catgttttat 2760 atgttcgcat aatctattat ttaactttct ttatggaacc aggcttgtaa taaagtaccg 2820 ctaagtcaga aaaaaaaaaa aaaaaaaaaa aaaaa 2855 // |
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