EBI Dbfetch

ID   BC047958; SV 1; linear; mRNA; STD; VRT; 2274 BP.
XX
AC   BC047958;
XX
DT   21-MAR-2003 (Rel. 75, Created)
DT   19-MAR-2009 (Rel. 100, Last updated, Version 9)
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DE   Xenopus laevis glycerol-3-phosphate dehydrogenase 1-like protein, mRNA
DE   (cDNA clone MGC:52863 IMAGE:4887955), complete cds.
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KW   MGC.
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OS   Xenopus laevis (African clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Xenopus.
XX
RN   [1]
RP   1-2274
RX   DOI; 10.1002/dvdy.10174
RX   PUBMED; 12454917.
RA   Klein S.L., Strausberg R.L., Wagner L., Pontius J., Clifton S.W.,
RA   Richardson P.;
RT   "Genetic and genomic tools for Xenopus research: The NIH Xenopus
RT   initiative";
RL   Dev. Dyn. 225(4):384-391(2002).
XX
RN   [2]
RP   1-2274
RX   DOI; 10.1073/pnas.242603899
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [3]
RC   NIH-MGC Project
RP   1-2274
RA   Klein S., Gerhard D.S.;
RT   ;
RL   Submitted (03-MAR-2003) to the EMBL/GenBank/DDBJ databases.
RL   National Institutes of Health, Xenopus Gene Collection (XGC), National
RL   Institute of Child Health and Human Development, 6100 Executive Boulevard,
RL   Room 4B01, Rockville, MD 20892-7510, USA
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DR   ImaGenes; IMAGp998F2010804Q.
DR   ImaGenes; IRAKp961A0895Q.
DR   ImaGenes; IRBHp990G113D.
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CC   Contact: XGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Dr. Igor Dawid
CC   cDNA Library Preparation: Life Technologies, Inc.
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Genome Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
CC   Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
CC   Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
CC   Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
CC   Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
CC   Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
CC   Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
CC   Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
CC   Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAK Plate: 95 Row: a Column: 8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2274
FT                   /organism="Xenopus laevis"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NICHD_XGC_Emb2"
FT                   /clone="MGC:52863 IMAGE:4887955"
FT                   /tissue_type="Embryo, stage 17/19, Xenopus"
FT                   /note="Vector: pCMV-SPORT6"
FT                   /db_xref="taxon:8355"
FT   gene            1..2274
FT                   /gene="kiaa0089"
FT                   /gene_synonym="gpd1l"
FT   CDS             10..1068
FT                   /codon_start=1
FT                   /gene="kiaa0089"
FT                   /gene_synonym="gpd1l"
FT                   /product="kiaa0089 protein"
FT                   /db_xref="GOA:Q801R8"
FT                   /db_xref="InterPro:IPR006109"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q801R8"
FT                   /protein_id="AAH47958.1"
FT                   /translation="MALAGPLKVCIVGSGNWGSAVAKIIGHNVKNMKKFASTVNMWVFE
FT                   ENINGRKLTEIINTEHENVKYLPGHKLPENVVALPNLTDAVRDADLLIFVIPHQFIHKV
FT                   CQEISGKVHKNALGITLIKGIDEGPEGLRLISDIIREKMNIDVSVLMGANIANEVAAEK
FT                   FCETTIGSKNKNHGLLFKELLQTPNFRITVVEDADTVELCGALKNIVAVAAGFCDGLSC
FT                   GDNTKAAVIRLGLMEMIAFANVFCKDSVSIATFLESCGVADLITTCYGGRNRKVAEAFV
FT                   KTGKSIEELEKEMLNGQKLQGPQTSAEVYRILQQKNMVNNFPLFTAVFQICYEGKPVED
FT                   VISCLQSHPEHM"
XX
SQ   Sequence 2274 BP; 714 A; 407 C; 444 G; 709 T; 0 other;
     ctctgaatca tggcgctcgc cggacccctc aaagtgtgca tagtgggctc ggggaactgg        60
     ggttctgcgg ttgccaaaat tataggtcac aatgttaaaa atatgaagaa attcgcatcc       120
     acggtcaata tgtgggtttt tgaagaaaac atcaatggac ggaaactaac agagatcatt       180
     aatacagaac atgagaatgt gaaatatctc cccgggcaca agctaccaga gaatgtggtt       240
     gctcttccaa acctcaccga tgcagtcaga gatgctgacc ttctcatttt tgtcattcca       300
     caccaattta tacataaagt ttgccaagag atttctggga aggtccacaa gaacgcactt       360
     gggataacac tcataaaggg cattgatgaa ggaccagaag gcctgcgtct tatttccgat       420
     attatccgtg aaaaaatgaa tattgacgtg agtgtgctga tgggggcaaa cattgcaaat       480
     gaagtggcag cagagaaatt ctgtgagaca acaataggca gcaaaaacaa gaatcacggc       540
     ctgctattta aagagctcct gcagactcca aatttcagaa taactgtggt agaggatgct       600
     gatacagtgg aactttgtgg agctttaaag aatattgtgg cagtggctgc tggattttgc       660
     gatggcctca gctgtggaga caacaccaaa gctgctgtta tccgtcttgg gctgatggag       720
     atgatcgcgt ttgccaatgt tttctgcaag gactctgtat ctatagccac atttttagag       780
     agctgtggag ttgcagatct tatcactaca tgttacggcg ggcgcaatcg aaaggtggct       840
     gaggcgtttg taaaaacagg aaagagcatc gaagagttgg aaaaagaaat gttgaatggg       900
     cagaagttac aagggcctca aacatctgca gaagtttacc gtatcctgca gcagaagaac       960
     atggtaaaca acttcccgct cttcactgct gtctttcaga tctgctatga aggcaaacct      1020
     gtggaagatg tcatttcatg tctgcagagc cacccggagc acatgtagct ctgaaccttg      1080
     gttcatggat catgtttctt ttgcttctag atatttgaaa actctggaat gcaatattca      1140
     cccaacgcac aagccacgga tgtggctaag tattaaatca caaatacaca ctccactact      1200
     gatcaataat acatttctgg tcaaaagaca tcaaaaacca tgctgcctaa agaaaataat      1260
     cagattttta tctttttttt taacagatca tgccacattt tgtctttctt aagattaaaa      1320
     tgagcataaa cacagtactg tagcaagctg taatcaaata ataatcagct gtacgctgtt      1380
     aataaaactg caaagtattg atatcaaatg tttttaacag cagttcctgg ttaacatatc      1440
     agcctcctat ttggcattac tgttttttca tttgattttt tttttatctg tgcacattaa      1500
     aacaatttat ttttttttat tttgggagct ttactacagc attacagtaa tcattggttt      1560
     gtgtgctgtt tacaatttta tgttgcgcat gttttaacta gacattttag atttgctgca      1620
     ttttatatta cacacacata tataagtgtg tgtgtgtgtg tatatatatg tatgtgtata      1680
     tatatatata tatatatata tatatatata tatatatata tatatataca cacacactgt      1740
     tacagaactc tgtggtattg tctgtcgttt ctcaatgcat ttggcagcat atactgcaaa      1800
     cctttataag ctgctgttgc tcaggggcca ttaaaacatg aataataaca tttttttttt      1860
     ggtattgcga tgcttatttt tcttaccatc tttctgtctg atgtttattt taaagcagct      1920
     tctgctgtga tgtgctgctc gttttaatgg atggcttata tatgacaaac accgtgcatt      1980
     aattgtgata ccctacagta ggataaaaag tgtttatttt agctggggaa aaagtgttaa      2040
     aacgtgaact agcttagttt tacaaataat atttgaaatt acaggtagat gatctgttct      2100
     ctggaaaccc attattcaga aagctccaaa tcacagaaag gtcatctccc atagactcca      2160
     ttatattgaa ataatgcaaa atgtatttct ctgtaacaat aaaactgtac catgtacttt      2220
     atccaaacta agatattaat taattcattg ccagaagcaa aaaaaaaaaa aaaa            2274
//