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EBI DbfetchID BC046044; SV 1; linear; mRNA; STD; VRT; 1607 BP. XX AC BC046044; XX DT 11-FEB-2003 (Rel. 74, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 12) XX DE Danio rerio zgc:56280, mRNA (cDNA clone MGC:56280 IMAGE:5602454), complete DE cds. XX KW MGC. XX OS Danio rerio (zebrafish) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. XX RN [1] RP 1-1607 RX DOI; 10.1073/pnas.242603899 RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1607 RG NIH MGC Project RA ; RT ; RL Submitted (31-JAN-2003) to the EMBL/GenBank/DDBJ databases. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR Ensembl-Gn; ENSDARG00000055240; Danio_rerio. DR Ensembl-Tr; ENSDART00000077553; Danio_rerio. DR ImaGenes; IMAGp998A1512396Q. DR ImaGenes; IRAKp961N20103Q. DR ImaGenes; IRBOp991E0521D. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Dr. Sumio Sugano CC cDNA Library Preparation: Dr. Sumio Sugano CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome CC Center, Stanford University School of Medicine, Stanford, CA 94305 CC Web site: http://www-shgc.stanford.edu CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, CC R. M. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRAK Plate: 103 Row: n Column: 20 CC This clone was selected for full length sequencing because it CC passed the following selection criteria: matched mRNA gi: 28278470. XX FH Key Location/Qualifiers FH FT source 1..1607 FT /organism="Danio rerio" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="Sugano SJD adult male" FT /clone="MGC:56280 IMAGE:5602454" FT /tissue_type="Whole body, adult male" FT /note="Vector: pME18S-FL3" FT /db_xref="taxon:7955" FT gene 1..1607 FT /gene="zgc:56280" FT /note="synonym: MGC56280" FT CDS 96..728 FT /codon_start=1 FT /gene="zgc:56280" FT /product="zgc:56280" FT /db_xref="GOA:Q7ZV14" FT /db_xref="HSSP:1GP1" FT /db_xref="InterPro:IPR012335" FT /db_xref="UniProtKB/Swiss-Prot:Q7ZV14" FT /db_xref="ZFIN:ZDB-GENE-040426-965" FT /protein_id="AAH46044.1" FT /translation="MEALGGYPSKSSASRAGLFKVLLSVALCMGSLYLLQNKLSKSRKT FT KDFYSYEVKDARGRTVSLEKYRGKVSLVVNVASGSELTEQSYRALQELHRELGTSHFNV FT LAFPCSQYGDTESGTSREIEAFAKSNYGVTFPIFNKIKIMGSEAEPAFRFLTDSVQKIP FT RWNFWKFLVSPEGQVVRFWKPEEPVSDIRKEATTLVRNIILKKRQEL" XX SQ Sequence 1607 BP; 458 A; 324 C; 363 G; 462 T; 0 other; tctgtcgtta gacacgcccc ctgctcctgg acacgcccac aaaaacttca acgttttttt 60 gccgagcttc ttttcccata tattgatcct ccatcatgga ggcgctcggg ggatacccca 120 gcaagtcttc tgcttcacga gcaggactgt tcaaagtctt gctgagtgtg gctttgtgca 180 tgggctcgct gtatctcctg cagaacaaac tgtcaaagtc gcgaaaaacc aaagatttct 240 actcgtatga ggtgaaggac gcgagaggca ggaccgtctc actggagaaa taccgaggga 300 aagtctctct ggttgtaaac gtggcgagtg gaagcgagtt aacggagcag agttaccggg 360 ctctgcagga gctgcacaga gagctcggca cgtcgcattt taacgtgctc gcgtttccct 420 gctcgcagta cggggacact gaatcaggta ctagccgaga aattgaagcg tttgccaaat 480 ccaactatgg cgtgacgttc cccatcttca acaagatcaa aataatgggc tctgaggcgg 540 agcccgcatt cagattcctc acagattctg tacagaagat tcccagatgg aacttctgga 600 agtttcttgt gagtcctgag ggccaagtgg tgcgtttctg gaagccagag gaacctgtaa 660 gtgacatccg gaaagaagcc acaacgcttg tcaggaatat catattgaag aagcgacagg 720 aactatgatg tgaacaaatc ccctcagaga ctcgagaatg attcattgtg cacgtttaag 780 tgcatcaaga tccttgttat gttatgttgg ttaatgtctg ggagaagatg tgtcagttaa 840 cacctgactt tgtatgcttg tgtgttaagc cctgctcgca ctgcgatttc agccatgatt 900 tggttgtctg agacacatac gagaaatcct tggccaaaat cggtgttctt tgattgttgg 960 tttgacatgt tcgacgatca aattttcact cggatgaagt ttaggcattg tcagaagact 1020 tcagacactt tcctgcagag tgatgacttg cattaaacca agaaccaata ggagcaccaa 1080 atatgatgtc aaagcatcaa aatgacaaac cagcatggca aaatgtcaaa acattaaact 1140 tttttttaat tctgttagtt cttttattag caagattacc tctacagttt gtttgtttgt 1200 ttgctgtatg gtattatttc agaacacata atagtgaatg tgtcatggca tcaaactccc 1260 ggggagtttt cttgcgtgtc tctgtttggc gcatcttgat tgtttttcag tctgacccta 1320 tgaaagctga gatcttacgg tgagacaatg gagtcttatt aatgcaacct gatgtgctac 1380 aattgtttat gattaggatt agaaccacag tgtgagccgg gcttttggtg aacacttgta 1440 taattttgag aaacaaaaca tctttaaaat ctttttacaa acctgaatgt gatcaagatg 1500 aagaatttaa tatatgaaaa ggttttaaat cacttttttt catctgacat gaaaacctca 1560 gcaataaaat ctgcaatttt gtaattgtaa aaaaaaaaaa aaaaaaa 1607 // |
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